task.py add defs variable FUSE_SERVER

the fuse server was referenced as localhost in the code. However, for
the separation of reposibilities to work correctly in the docker
installation it was necessary to add a variable in order to be able to
reference the correct container for running custom fuse jobs

docker/vidjil/conf/defs.py

@@ -42,6 +42,7 @@ DIR_MIXCR = '/usr/bin'
 DIR_GERMLINE = '/usr/share/vidjil/germline'
 ### Port on which to run the fuse server
 ### Used in models/task.py and in /server/fuse_server.py
+FUSE_SERVER = 'fuse'
 PORT_FUSE_SERVER = 12789
 
 ### Log files

server/web2py/applications/vidjil/models/task.py

@@ -577,7 +577,7 @@ def custom_fuse(file_list):
             files += os.path.abspath(defs.DIR_RESULTS + db.results_file[id].data_file) + " "
     
     cmd = "python "+ os.path.abspath(defs.DIR_FUSE) +"/fuse.py -o "+output_file+" -t 100 "+files
-    proc_srvr = xmlrpclib.ServerProxy("http://localhost:%d" % defs.PORT_FUSE_SERVER)
+    proc_srvr = xmlrpclib.ServerProxy("http://%s:%d" % (defs.FUSE_SERVER, defs.PORT_FUSE_SERVER))
     fuse_filepath = proc_srvr.fuse(cmd, out_folder, output_filename)
     
     try:

server/web2py/applications/vidjil/modules/defs.py.sample

@@ -48,6 +48,7 @@ DIR_GERMLINE = DIR_VIDJIL + 'germline/'
 
 ### Port on which to run the fuse server
 ### Used in models/task.py and in /server/fuse_server.py
+FUSE_SERVER = 'localhost'
 PORT_FUSE_SERVER = 12789
 
 ### Log files