Commit b34cc22d authored by Mathieu Giraud's avatar Mathieu Giraud

core/segment.cpp: JUNCTION{start,end} initialization

Thanks to Valgrind
parent 5815bf0d
...@@ -368,6 +368,9 @@ KmerSegmenter::KmerSegmenter(Sequence seq, Germline *germline, double threshold, ...@@ -368,6 +368,9 @@ KmerSegmenter::KmerSegmenter(Sequence seq, Germline *germline, double threshold,
CDR3start = -1; CDR3start = -1;
CDR3end = -1; CDR3end = -1;
JUNCTIONstart = -1;
JUNCTIONend = -1;
label = seq.label ; label = seq.label ;
sequence = seq.sequence ; sequence = seq.sequence ;
info = "" ; info = "" ;
...@@ -864,6 +867,9 @@ FineSegmenter::FineSegmenter(Sequence seq, Germline *germline, Cost segment_c, ...@@ -864,6 +867,9 @@ FineSegmenter::FineSegmenter(Sequence seq, Germline *germline, Cost segment_c,
CDR3start = -1; CDR3start = -1;
CDR3end = -1; CDR3end = -1;
JUNCTIONstart = -1;
JUNCTIONend = -1;
bool reverse_V = false ; bool reverse_V = false ;
bool reverse_J = false ; bool reverse_J = false ;
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment