task.py mixcr alignment_filepath is no longer used

b0eafb9c · HERBERT Ryan · 2a078d1c · b0eafb9c
Commit b0eafb9c authored Feb 25, 2016 by HERBERT Ryan
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server/web2py/applications/vidjil/models/task.py server/web2py/applications/vidjil/models/task.py +0 -3

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--- a/server/web2py/applications/vidjil/models/task.py
+++ b/server/web2py/applications/vidjil/models/task.py
@@ -252,9 +252,6 @@ def run_mixcr(id_file, id_config, id_data, id_fuse, clean_before=False, clean_af

    ## Get result file
    print "===>", out_results
-    alignments_filepath = os.path.abspath(out_alignments)
-
-
    results_filepath = os.path.abspath(out_results)
    try:
        stream = open(results_filepath, 'rb')