Commit b0c0faf1 authored by florian.thonier's avatar florian.thonier

should.vdj : add reals sequences to test the fine segmenter

The seq names have the current Necker nomenclature that i use.
Each files have 3 sequences comming from reals analysis.
parent de1dc944
>TRBD2_8/10/2_TRBJ2-7
CTGCGCTTCCTGCCGCTGCCcaGTGGTTGGGGGAGGGGGACtaGCAGGGAGGAAACATTTTTGTATcaTGGTGTAACATTGTGGGGACTAGTGTCAGTCCCCCTACGAGCAGTACTTCGGGCCGGGCACCAGGCTCACGGTTACAGGTAAGA
>TRBD2-2_3/9/7_TRBJ2-1
CTGCGCTTCCTGCCGCTGCCcaGTGGTTggggGAGGGGGACtaGCAGGGAGGAAACATTTTTGTATATGGTGTAACATTGTGGGGACTAGCGGGAAGTAGGAGGAATGAgCAGTTCTTCGGGCCAGGGACACGGCTCACCGTGCTAGGTAAGAAGG
>TRBD2-01_2/26/2_TRBJ2-3
CTGCGCTTCCTGCCGCTGCCcaGTGGTTGGGGGAGGGGGACtaGCAGGGAGGAAACATTTTTGTATATGGTGTAACATTGTGGGGACTAGCGGGGGAGAAATTTCCAGTGTCACCTCCGTTACACAGATACGCAGTATTTTGGCCCAGGCACCCGGCTGACAGTGCTCGGTAAGCGGG
\ No newline at end of file
>TRBV6-1_7/0/12_TRBD2_1/8/2_TRBJ2-7
GAGGGTACCACTGACAAAGGAGAAGTCCCCAATGGCTACAATGTCTCCAGATTAAACAAACGGGAGTTCTCGCTCAGGCTGGAGTCGGCTGCTCCCTCCCAGACATCTGTGTACTTCTGTGCCAGCAAGGTGAGTCCCCCTACGAGCAGTACTTCGGGCCGG
>TRBV7-2_3/1/0_TRBJ2-3
TTACCCTTTACTGGTACCGGCAGAGGCTGGGGCAGGGCCTGGAGTTTTTAATTTACTTCCAAGGCAACAGTGCACCAGACAAATCAGGGCTGCCCAGTGATCGCTTCTCTGCAGAGAGGACTGGGGAATCCGTCTCCACTCTGACGATCCAGCGCACACAGCAGGAGGACTCGGCCGTGTATCTCTGTGCCAGCAGCTTTAGCACAGATACGCAGTATTTTGGCCCAGGCACCCGGCTGACAGTGCTCGGTAAGCGGG
>TRBV_1/8/4_TRBJ2-7
AACGGTGTAGTGGATGATTCACAGTTGCCTAAGGATCGATTTTCTGCAGAGAGGCTCAAAGGAGTAGACTCCACTCTCAAGATCCAGCCTGCAAAGCTTGAGGACTCGGCCGTGTATCTCTGTGCCAGCAGCTTAGGTCCCTCGTACGAGCAGTACTTCGGGCCGGGCACCAGGCTC
>TRDD2_3/7/0_TRDD3
gcgGGTGGtGATGGCAAAGTGCCAAGGAAAGGGAAAAAGGAAGAAGAGGGTTTTTATACTGATGTGTTTCATTGTGCCTTCCCCCCCCTACTGGGGGAtACGCACAGTGCTACAAAACCTACAgAGACCTGTACAAAAACTGCAGGGGCAAAAGTGCCATTTCCCTGGGATATCCTCACCCTGGGTcCcaaa
>TRDD2_0/4/3_TRDD3_0/2/3_TRDJ1
AgcgggtggtgatggcaaagtgccaaggaaagggaaaaaggaagaagagggtttttatactgatgTGTTTCATTGTGCCTTCCTACGTGAGGGGGATACGCCCCGATAAACTCATCTTTGGAAAAGGAACCCGTGTGACTGTGGAAC
>TRDV5_3/8/3_TRDD2_1/0/3_TRDD3_0/0/2_TRDJ1
cattAggtAAAAATGaagatGGAAGATTCACTGTCTTCTTAAACAAAAGTGCCAAGCACCtctcTctGCACATTGTGCCCTCCCAGCCTGGAGACTCTGCAGTGTACTTCTGTGCAGCAACACCGAGATCCTAGGGGGATACgACCGATAAACTCATCTTTGGAAAAGGAACCCGTGTGACTGTGgAACa
\ No newline at end of file
>TRDV1_0/1/4_TRDD3_4/11/0_TRDJ1
CAAAAAGTGGTCGCTATTCTGTCAACTTCAAGAAAGCAGCGAAATCCGTCGCCTTAACCATTTCAGCCTTACAGCTAGAAGATTCAGCAAAGTACTTTTGTGCTCTTGGGGAACTAGGGGACTGGTCCCCTTACACCGATAAACTCATCTTTGGAAAAGGAACCCGTGTGACTGTGGAAc
>TRDV5_0/9/0_TRDD3_0/9/2_TRDJ1
GAtAAAAATGAAGatGGAAGaTTcaCTGTCTTCTTAAAcAAAAGTGCcaAGCACCTCTCTCTGCACATTGTGCCCTCCCAGCCTGGAGACTCTGCAGTGTACTTCTGTGCAGCAAGCGCGAATCCTGACTGGGGGATCGAGGGGGAACCGATAAACTCATCTTTGGAAAAGGAACCCGTGTGACTGTGGAACA
>TRDV1_5/14/0_TRDJ1
GCCttAcAGCtAGAAgattcAGCAAaGtACtnttGtGCtCttGGGACCCtttCCcGtGtACACCGATAAACtCAtCtttGGAAAAgGAACCCGtGtGACtGTGGAACA
\ No newline at end of file
>TRGV4_3/15/2_TRGJ1-1
GCGTCTTCTGTacTATGACTCCTACACCTCcaGCGTTGTGTTGGAATcaGGAATcaGCCCAGGGAAGTATGATACTTATGGAAGCACAAGGAAgAACTTGAGAATGATACTGCGAAATCTTATTGAAAATGACTCTGGAGTCTATTACTGTGCCACCTGGGATAAGGAGGGACATAAgATTATTATAAGAAACTCTTTGGCAGTGGAACAACACTGGTTGTCACAGGTA
>TRGV11_2/5/0_TRGJ1
TGGTGTACCaCTGTGCcTGCtgGaTTAGGCTCCTAGAATTATTATAAGAAACTCTTTGGCAGTGGAACAACACTGGTTGTCACAGGTaagtatcggaagaatacaacattccaaggtaatagagggaaagcaggaa
>TRGV10_14/18/1_TRGJ1-1
ATCCtttACcaTCaAGtCCGtAGAGAAAGAAGACAtGGCCGTttACTACtGtGCtACCGCtGGAgGtCCttACAAttAtTAtAAGAAACtCTttGGCAGTGGAACAACACtGGTtGTCACAGGTA
\ No newline at end of file
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