bug2214: Include buggy reads

See #2214. The should-get is not included yet as the bug is an infinite loop it would break the build by timing out. The should-get will be committed later. The only options to run Vidjil are -r 1 -z 1 -g germline

bug2214: Include buggy reads
See #2214. The should-get is not included yet as the bug is an infinite loop it would break the build by timing out. The should-get will be committed later. The only options to run Vidjil are -r 1 -z 1 -g germline
a988953f · Mikaël Salson · 95acf0e2 · a988953f
Commit a988953f authored Mar 02, 2017 by Mikaël Salson
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algo/tests/bugs/bug2214.fa algo/tests/bugs/bug2214.fa +18 -0

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--- a/algo/tests/bugs/bug2214.fa
+++ b/algo/tests/bugs/bug2214.fa
+>M02707:35:000000000-AYHTM:1:1118:11403:1189 1:N:0:69
+ACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTTGATAACCACTCCAAAAATCGT
+AATAGTATTCTCAGCCCCGTGGCTCGGCTCTCAGGCTGTTCNNNNNNNGATACAGTGAGN
+NCTTGGCGTNGTCTNNGGAGATGGTGAATCNNNNNNTCACTGAGTCNNNNNAGTATATNN
+NNNNNCTACTACNNNNAANGGATGAGNNNNNNNCCAGCCCNNNNNNNGGAGCCTNNNNNN
+NCCAGTTCNNNNNNNAGCTACTNNNNNNNAATCCAGNNNNNNNACAGGAGNNNNNNNGGG
+>M02707:35:000000000-AYHTM:1:1119:15975:1189 1:N:0:69
+ACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTTGATAACCACTCCAAAAATCGT
+AATAGTATTCTCAGCNCCGTGGCTCGGCTCTCAGGCTGTTCNNNNNNNGATACAGTGANN
+NNTTGGCGTNNNCNNNGGAGATGGTGAATCNNNNNNNCACTGAGTCNNNNNAGTATATNN
+NNNNNCTACTACNNNNANNGGATGAGNNNNNNNCCAGCCCNNNNNNNGGAGCCTNNNNNN
+NCCAGTTCNNNNNNNAGCTACTNNNNNNNAATCCAGNNNNNNNACAGGAGNNNNNNNGGG
+>M02707:35:000000000-AYHTM:1:2119:9424:1397 1:N:0:69
+ACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTTGATAACCACTCCAAAAATCGT
+AATAGTATTCTCAGNNCCNTGGCTCGGCTNTCNGGCTGTTCNNNNNNNGATACAGTGNNN
+NNTTGGCGTNNNNNNNGGAGATGGTGAATCNNNNNNNCACTGAGNNNNNNNAGTATATNN
+NNNNNCTACTACNNNNNNNGGATGAGNNNNNNNCCAGCCCNNNNNNNGGAGCCTNNNNNN
+NCCAGTTCNNNNNNNAGCTACTNNNNNNNAATCCAGNNNNNNNACAGGAGNNNNNNNGGG