Commit a988953f authored by Mikaël Salson's avatar Mikaël Salson
Browse files

bug2214: Include buggy reads

See #2214. The should-get is not included yet as the
bug is an infinite loop it would break the build
by timing out. The should-get will be committed later.

The only options to run Vidjil are -r 1 -z 1 -g germline
parent 95acf0e2
>M02707:35:000000000-AYHTM:1:1118:11403:1189 1:N:0:69
ACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTTGATAACCACTCCAAAAATCGT
AATAGTATTCTCAGCCCCGTGGCTCGGCTCTCAGGCTGTTCNNNNNNNGATACAGTGAGN
NCTTGGCGTNGTCTNNGGAGATGGTGAATCNNNNNNTCACTGAGTCNNNNNAGTATATNN
NNNNNCTACTACNNNNAANGGATGAGNNNNNNNCCAGCCCNNNNNNNGGAGCCTNNNNNN
NCCAGTTCNNNNNNNAGCTACTNNNNNNNAATCCAGNNNNNNNACAGGAGNNNNNNNGGG
>M02707:35:000000000-AYHTM:1:1119:15975:1189 1:N:0:69
ACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTTGATAACCACTCCAAAAATCGT
AATAGTATTCTCAGCNCCGTGGCTCGGCTCTCAGGCTGTTCNNNNNNNGATACAGTGANN
NNTTGGCGTNNNCNNNGGAGATGGTGAATCNNNNNNNCACTGAGTCNNNNNAGTATATNN
NNNNNCTACTACNNNNANNGGATGAGNNNNNNNCCAGCCCNNNNNNNGGAGCCTNNNNNN
NCCAGTTCNNNNNNNAGCTACTNNNNNNNAATCCAGNNNNNNNACAGGAGNNNNNNNGGG
>M02707:35:000000000-AYHTM:1:2119:9424:1397 1:N:0:69
ACCTGAGGAGACGGTGACCAGGGTTCCCTGGCCCCAGTTGATAACCACTCCAAAAATCGT
AATAGTATTCTCAGNNCCNTGGCTCGGCTNTCNGGCTGTTCNNNNNNNGATACAGTGNNN
NNTTGGCGTNNNNNNNGGAGATGGTGAATCNNNNNNNCACTGAGNNNNNNNAGTATATNN
NNNNNCTACTACNNNNNNNGGATGAGNNNNNNNCCAGCCCNNNNNNNGGAGCCTNNNNNN
NCCAGTTCNNNNNNNAGCTACTNNNNNNNAATCCAGNNNNNNNACAGGAGNNNNNNNGGG
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