Commit a7d11fab authored by Mathieu Giraud's avatar Mathieu Giraud

vidjil-algo: release 2020.06

see #4319
parent c779cdbc
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This changelog concerns vijil-algo, the algorithmic part (C++) of the Vidjil platform.
2020-06-12 The Vidjil Team
* New report of 'start of V' and 'end of J' positions #2138, improving the productivity estimation #2142
This is based on a streamlined alignment for reverse sequences (core/segment.cpp) !706
* Faster and improved probability computations (core/proba.cpp) !679
This will bring further speed-ups in a future release
* Ctrl-C now gracefully stops execution with a warning W09 and some output #4286
* Streamlined handling of warnings #3360, also reported with -c designations #3811
* Better and more reproducible speed and memory benchmarks (benchmark-releases.py, #4275) #918, new profiling #918
* Adoption of 'detected' term, renamed output files to '.detected.vdj.fa' #3413
* Updated documentation
* New and updated tests
* Better release process through a merge request template !685
2020-05-02 The Vidjil Team
* Bug closed (crash in very rare cases #4272)
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# vidjil-algo 2020.05
# vidjil-algo 2020.06
**Command-line manual**
*The Vidjil team (Mathieu, Mikaël, Aurélien, Florian, Marc, Tatiana and Rayan)*
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