Commit a6e67abb authored by Mathieu Giraud's avatar Mathieu Giraud
Browse files

tests: update tests, vidjil-algo in test output

parent 0ca81744
......@@ -3,7 +3,7 @@
# Test examples embedded in 'doc/algo.org'
# Run 8 times
8:Vidjil -- V.D.J recombinations analysis
8:vidjil-algo -- V.D.J recombinations analysis
# '-c clone' (or implied), five times
5: end of clones
......
......@@ -3,7 +3,7 @@
# Test examples embedded in './vidjil-algo -h'
# Run 6 times (-h + 5 examples)
6:Vidjil -- V.D.J recombinations analysis
6:vidjil-algo -- V.D.J recombinations analysis
# '-c clone', two times
2: end of clones
......
!LAUNCH: $VIDJIL_DIR/$EXEC $VIDJIL_DEFAULT_OPTIONS -H 2> out-v ; cat out-v
$ License
1:Vidjil is free software
1:vidjil-algo is free software
$ Check default costs
1:segmenter .* "4, -6, -10, -1, -10"
......
!LAUNCH: $VIDJIL_DIR/$EXEC $VIDJIL_DEFAULT_OPTIONS -h 2> out-v ; cat out-v
$ License
1:Vidjil is free software
1:vidjil-algo is free software
$ Check default filtering options
1:minimal number of reads supporting a clone .*: 5
......
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