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vidjil
vidjil
Commits
9fa2024b
Commit
9fa2024b
authored
Mar 31, 2021
by
Mathieu Giraud
Browse files
tests: update
parent
c6a57bd9
Pipeline
#231877
passed with stages
in 36 minutes and 18 seconds
Changes
2
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algo/tests/bugs/bug4225.should
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9fa2024b
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@@ -2,7 +2,8 @@
!LAUNCH: $VIDJIL_DIR/$EXEC -c windows -g $VIDJIL_DIR/germline -r 1 -1 -2 -K bug4225-j.fa
$ Show name and sequence
1:>igkj1 GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC
1:>igkj1
1:GTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAAC
$ Display three lines per system
3:TRG
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algo/tests/should-get-tests/multi-short-affects.should
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9fa2024b
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@@ -3,7 +3,7 @@
# Testing .affects output (-K)
$ First sequence (TRA), display sequence
1:
>TRA.*
TCTTCATTCCTTAGTCGCTCTGATAGTTATGGTTACCTCCTTCTACAGGAGCTCCAGATGAAAGACTCTGCCTCTTACTTCTGCGCTGTGAGAGAGTATGAAAGTATTACCTCCCAGTTGCAATTTGGCAAAGGAACCAGAGTTTCCACTTCTCC
1:TCTTCATTCCTTAGTCGCTCTGATAGTTATGGTTACCTCCTTCTACAGGAGCTCCAGATGAAAGACTCTGCCTCTTACTTCTGCGCTGTGAGAGAGTATGAAAGTATTACCTCCCAGTTGCAATTTGGCAAAGGAACCAGAGTTTCCACTTCTCC
$ First sequence (TRA), count of k-mers
1:129 .* TRA
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