Commit 98791511 authored by Mathieu Giraud's avatar Mathieu Giraud

should-vdj: 10 Vd2-Ja29 and 6 Db-Jb sequences from Prague

parent 7692c139
#2401-1-M Db1.gb
>TRBD1 TRBJ1-3 [TRB+]
nnnnnnnnnngnnnnngtgcctggnggtgagaaggaagcccccggcctggtccatacccc
accaccaacttgcataatggggggtgatgtcacccaccctccactcccctcaaaggagca
gctgctctggtggtctctcccaggctctgggggcggacccatgggaggggctgtttttgt
acaaagctgtaacattgtggggacagggccgggggtctggaaacaccatatattttggag
agggaagttggctcactgttgtaggtaagannnnnnnnnnnnnnnnnnnnannngncnna
nnnnnnnnnnnatcnnnnnnannnnnnnnnnnnnnnnnnnnnnnannnnnnnnnnncnnn
nnnnnnttnnnnnnnncnnnnnaanaannnntgnnnaannnattgnnccatnannnnnnn
gnnnnnnntgnnntnnnnnnnttcnnnnnntnnnnngnnnnggnctnctnatnnnnnnnn
ngnnnnnncnnnngntccagacgntnnnnnncnncctgggcngnntcanantnnnanncn
nnnnnnnnngnncnccnnncnannnnnnnnnncnnagnngnnnnnnnnnnnncctnnngc
agnaggnnnngnnnnntgncnnncanantnnnnncannannnnatnnccnn
#2439-1-M Db1.gb
>TRBD1 TRBJ1-2 [TRB+]
nnnnnnnnnnnnntcctnnnnnnnngcctggnggtgagaaggaagcccccggcctggtcc
ataccccaccaccaacttgcataatggggggtgatgtcacccaccctccactcccctcaa
aggagcagctgctctggtggtctctcccaggctctgggggcggacccatgggaggggctg
tttttgtacaaagctgtaacattgtggggacagggcgctaactatggntacnccttcggt
tcggggaccaggttaaccgttgtaggnnnnnnnnnctcggntncnannnnnnnncntngc
nannnnntnnnnnnnnnaatannnnnnntanntttcntcnnnnnnnnnntggnnnnatnn
cttncnnnnannntnntnatnannnnntnatnaaaannnnnngnnnannnnnttnnncca
tnantcctntnattannnngnnncagnnnnnnncnnnntntgnnnnnnngnnnnnnnnan
nnnnnnnnnnnnnnnnnaccnnnnncagannntcnnntncnncntgnnnnnnntnannnn
ncnannnnacnnnnnnggnncnnnnnncnnannnntcnntccacncnnnnatncnnnnnn
ncctnnnnnaggagncnangcannnngccncncgaannnnngtnannnaannnnnnnnnc
angnnancannnnnn
#2451-1-P Db2.gb
>TRBD2 TRBJ2-4 [TRB+]
nnnnnnnnnnnnnnnnnntgccngtggttgggggagggggactagcagggaggaaacatt
tttgtatcatggtgtaacattgtggggactagcgggggccatagccaaaaacattcagta
cttcggcgccgggacccggctctcagtgctgggtaagctggannnnnannnnntgtnnnn
gnanannnnnnnnnnnntntnnnnnnnggctcgnnggcngtgaccnnnanacnnnnnnnn
nnnnnncaggnnngcgnnnncnnggngnncnntgtnnnngnnn
#2504-1-P Db1.gb
>TRBD1 TRBJ1-2 [TRB+]
nnnnnnnnnnnnnnntccnnnngnnngtgcctggnggtganaaggaagcccccggcctgg
tccataccccaccaccaacttgcataatggggggtgatgtcacccaccctccactcccct
caaaggagcagctgctctggtggtctctcccaggctctgggggcggacccatgggagggg
ctgtttttgtacaaagctgtaacattgagcttaactatggctacaccttcggttcgggga
ccaggttaaccgttgtaggtaaga
#2514-1-M Db1.gb
>TRBD1 TRBJ1-5 [TRB+]
nnnnnnnnnnnnnnnnnnnnntnnnnnnnngcctggnggtgannnnnnngcccccggcct
ggtccataccccaccaccaacttgcataatggggggtgatgtcacccaccctccactccc
ctcaaaggagcagctgctctggtggtctctcccaggctctgggggcggacccatgggagg
ggctgtttttgtacaaagctgtaacattgtggggacagggtaccgctcaatcagccccag
cattttggtgatgggactcgactctccatcctaggtaaga
#2544-1-M Db1.gb
>TRBD1 TRBJ2-7 [TRB+]
nnnnnnnnnnnnntcctnnnnnngtgcctggaggtgagaaggaagcccccggcctggtcc
ataccccaccaccaacttgcataatggggggtgatgtcacccaccctccactcccctcaa
aggagcagctgctctggtggtctctcccaggctctgggggcggacccatgggaggggctg
tttttgtacaaagctgtaacattgtggggacaggggaccctacgagcagtacttcgggcc
gggcaccaggctcacggttacaggtaag
#1048-1-MVD2-JA29.gb
>TRDV2 TRAJ29 [TRA+D]
tcccctyyagtgytccatgaaggagagcgatcggtaactactatatcaactggtacagga
agacccaaggtaacacaatcactttcatataccgagaaaaggacatctatggccctggtt
tcaaaracaatttccaaggtgacattgatattgcaaaraacctggctgtacttaaratac
ttgcaccatcararagagatgaagggtcttactaccccgacgggcacaagactttctgtg
attgcaagtaagtgtttctagccatccttgattttgatcagcaakggcttcttcccttga
attatttttcagtgwacctagawggsyttttgcmaaa
#2475-1-M Vd2Ja29.gb
>TRDV2 TRAJ29 [TRA+D]
nnnnnnnnnnnnnnnnctccntnnnnnnnancgatcggtaactactatatcaactggtac
aggaaganccaaggtaacacaatgactttcatataccgagaaaaggacatctatggccct
ggtttcaaagacaatttccaaggtgacattgatattgcaaagaacctggctgtacttaag
atacttgcaccatcagagagagatgaagggtcttactactgtgcctgtgacctctgtact
gggggatacgcgaggcaggaaacacacctcttgtctttggaaagggcacaagactttctg
tgattgcaagtaagtgtttctagccatccttgattttgatcagcaatgncttcttccctt
gaattatttttcagtgtacctagaangcttttgcnn
#2491-1-M Vd2Ja29.gb
>TRDV2 TRAJ29 [TRA+D]
nnnnnnnnnnnnnnnnnntnnnngnnancgatcggtaantactatatcaactggtacagg
aagacccaaggtaacacaatcactttcatataccgagaaaaggacatctatggccctggt
ttcaaagacaatttccaaggtgacattgatattgcaaagaacctggctgtacttaagata
cttgcaccatcagagagagatgaagggtcttactactatcactggggttccccccttcag
gaaacacacctcttgtctttggaaagggcacaagactttctgtgattgcaagtaagtgtt
tctagccatccttgattttgatcagcaatggcttcttcccttgaattatttttcagtgta
cctagaannttttgccann
#2500-1-M Vd2Ja29.gb
>TRDV2 TRAJ29 [TRA+D]
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgatcgnnnnnnactatatcaactggnac
aggaagacccaaggtaacacaatcactttcatataccgagaaaaggacatctatggccct
ggtttcaaagacaatttccaaggtgacattgatattgcaaagaacctggctgtacttaag
atacttgcaccatcagagagagatgaagggtcttactactgtgcctgtgactccaagaag
gtccgggggtccacccttcagggaaacacacctcttgtctttggaaagggcacaagactt
tctgtgattgcaagtaagtgtttctagccatccttgattttgatcagcaatggcttcttc
ccttgaattatttttcagtgtacctagaatgcttttgccan
#2511-1-M Vd2Ja29.gb
>TRDV2 TRAJ29 [TRA+D]
nnnnnnnnnnnnnnnnnnnnnnnnngnnancgatcggtaactactatatcaactggtaca
ggaagacccaaggtaacacaatcactttcatataccgagaaaaggacatctatggccctg
gtttcaaagacaatttccaaggtgacattgatattgcaaagaacctggctgtacttaaga
tacttgcaccatcagagagagatgaagggtcttactactgtgcctgtgacaccggagggg
aaggaaacacacctcttgtctttggaaagggcacaagactttctgtgattgcaagtaagt
gtttctagccatccttgattttgatcagcaatggcttcttcccttgaattatttttcagt
gtacctagaatgcttttgccaaa
#2521-1-M Vd2Ja29.gb
>TRDV2 TRAJ29 [TRA+D]
nnnnnnnnnccnnnnnnnnncnnnnnnnnanancgatcggtaactactatatcaactggt
acaggaagacccaaggtaacacaatgactttcatataccgagaaaaggacatctatggcc
ctggtttcaaagacaatttccaaggtgacattgatattgcaaagaacctggctgtactta
agatacttgcaccatcagagagagatgaagggtcttactactgtgcctgtgacaccgggg
ggatcaggaggaaacacacctcttgtctttggaaagggcacaagactttctgtgattgca
agtaagtgtttctagccatccttgattttgatcagcaatggcttcttcccttgaattatt
tttcagtgtacctagaangcttttgccan
#2522-1-M Vd2Ja29.gb
>TRDV2 TRAJ29 [TRA+D]
ntnnnaaannntgcctgtgtcaataggganccctgccaccctcaggtgctccatgaaagg
agaagcgatcggtaactactatatcaactggtacaggaagacccaaggtaacacaatcac
tttcatataccgagaaaaggacatctatggccctggtttcaaagacaatttccaaggtga
cattgatattgcaaagaacctggctgtacttaagatacttgcaccatcagagagagatga
agggtcttactactgtgcctgtgacggactgggggatacgcgccctcaggaaacacacct
cttgtctttggaaagggcacaagactttctgtgattgcaagtaagtgtttctagccatcc
tngnnttnnncagcaannnnnnnnnnnn
#2534-1-M Vd2Ja29.gb
>TRDV2 TRAJ29 [TRA+D]
nnnnnnnnnnnnnnnnnnnnnntnnnnnnnnnngcgatcggnnnnnnntatatnaactgg
tacaggaagacccnaggtaacacaatgactttcatataccgagaaaaggacatctatggc
cctggtttcaaagacaatttccaaggtgacattgatattgcaaagaacctggctgtactt
aagatacttgcaccatcagagagagatgaagggtcttactactgtgcctgtgacaccgac
tgggggtcccctatatcacctcttgtctttggaaagggcacaagactttctgtgattgca
agtaagtgtttctagccatccttgattttgatcagcaatggcttcttcccttgaattatt
tttcagtgtacctagaatgcttttgccnn
#2538-2-M Vd2Ja29.gb
>TRDV2 TRAJ29 [TRA+D]
nnnnnnnnnnnnnnnnnnnnnnnnnnancgatcggtaactactatatcaactggtacagg
aaganccaaggtaacacaatcactttcatataccgagaaaaggacatctatggccctggt
ttcaaagacaatttccaaggtgacattgatattgcaaagaacctggctgtacttaagata
cttgcaccatcagagagagatgaagggtcttactactgtgcctgttcttccccggccggg
cggcaaaaagagagggttcaggaaacacacctcttgtctttggaaagggcacaagacttt
ctgtgattgcaagtaagtgtttctagccatccttgattttgatcagcaatggcttcttcc
cttgaattatttttcagtgtacctagaatgcttttgccan
#2543-1-M Vd2Ja29.gb
>TRDV2 TRAJ29 [TRA+D]
nnnnnnnnnnnnnnnncncntnnnngnnancgatcggtaactactatatcaactggtaca
ggaagacccaaggtaacacaatgactttcatataccgagaaaaggacatctatggccctg
gtttcaaagacaatttccaaggtgacattgatattgcaaagaacctggctgtacttaaga
tacttgcaccatcagagagagatgaagggtcttactactgtgcctgtgacccctagtggg
ggatacgcaggaggaaacacacctcttgtctttggaaagggcacaagactttctgtgatt
gcaagtaagtgtttctagccatccttgattttgatcagcaatggcttcttcccttgaatt
atttttcagtgtacctagaatgcttttgccnn
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