core/windows.{h,cpp}: remove unused getters

algo/core/windows.cpp

@@ -10,22 +10,10 @@
 
 WindowsStorage::WindowsStorage(map<string, string> &labels):windows_labels(labels) {}
 
-map<junction, list<Sequence> > &WindowsStorage::getMap() {
-  return seqs_by_window;
-}
-
 list<pair <junction, int> > &WindowsStorage::getSortedList() {
   return sort_all_windows;
 }
 
-size_t WindowsStorage::getNbReads(junction window) {
-  return seqs_by_window[window].size();
-}
-
-vector<int> WindowsStorage::getStatus(junction window) {
-  return status_by_window[window];   
-}
-
 string WindowsStorage::getLabel(junction window) {
   
   if (windows_labels.find(window) == windows_labels.end())
@@ -93,10 +81,6 @@ void WindowsStorage::setIdToAll() {
     }
 }
 
-int WindowsStorage::getId(junction window) {
-    return id_by_window[window];
-}
-
 void WindowsStorage::add(junction window, Sequence sequence, int status, Germline *germline) {
   seqs_by_window[window].push_back(sequence);
   if (status_by_window.find(window) == status_by_window.end() ) {

algo/core/windows.h

@@ -38,20 +38,6 @@ class WindowsStorage {
    */
   WindowsStorage(map<string, string> &labels);
 
-  /**
-   * Return the map storing the elements
-   */
-  map<junction, list<Sequence> > &getMap();
-
-  /**
-   * @return the number of reads supporting a given window
-   */
-  size_t getNbReads(junction window);
-
-  /**
-   * @return the segmented status of reads supporting a given window
-   */
-  vector<int> getStatus(junction window);
   Germline *getGermline(junction window);
   
   JsonList statusToJson(junction window);