Commit 96f8eb1a authored by Mathieu Giraud's avatar Mathieu Giraud

doc/algo.org: installation with a static binary

parent 0a82a81b
...@@ -53,9 +53,12 @@ Vidjil is developed with continuous integration using systematic unit and functi ...@@ -53,9 +53,12 @@ Vidjil is developed with continuous integration using systematic unit and functi
The development team internally uses [[https://jenkins-ci.org/][Jenkins]] for that. The development team internally uses [[https://jenkins-ci.org/][Jenkins]] for that.
Moreover, the results of some of these tests can be publicly checked on [[https://travis-ci.org/vidjil/vidjil][travis-ci.org]]. Moreover, the results of some of these tests can be publicly checked on [[https://travis-ci.org/vidjil/vidjil][travis-ci.org]].
** Requirements ** Build requirements (optional)
To install and use Vidjil, make sure: This paragraph details the requirements to build Vidjil from source.
You can also download a static binary (see next paragraph, 'Installation').
To compile Vidjil, make sure:
- to be on a POSIX system ; - to be on a POSIX system ;
- to have a C++11 compiler (as =g++= 4.8 or above or =clang= 3.3 or above) - to have a C++11 compiler (as =g++= 4.8 or above or =clang= 3.3 or above)
- to have the =zlib= installed (=zlib1g-dev= package under Debian/Ubuntu, - to have the =zlib= installed (=zlib1g-dev= package under Debian/Ubuntu,
...@@ -151,7 +154,14 @@ make germline ...@@ -151,7 +154,14 @@ make germline
# Lefranc, M.-P., IMGT®, the international ImMunoGeneTics database, # Lefranc, M.-P., IMGT®, the international ImMunoGeneTics database,
# Nucl. Acids Res., 29, 207-209 (2001). PMID: 11125093 # Nucl. Acids Res., 29, 207-209 (2001). PMID: 11125093
make # compile Vijil
# either
make # build Vijil from the sources (see the requirements, above)
# or
wget http://bioinfo.lifl.fr/vidjil/vidjil-2015.10.2_x86_64 -O vidjil
# download a static binary (built for x86_64 architectures)
make test # (optional) run self-tests (can take 5 to 60 minutes) make test # (optional) run self-tests (can take 5 to 60 minutes)
./vidjil -h # display help/usage ./vidjil -h # display help/usage
......
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