Commit 8fd6364f authored by Mathieu Giraud's avatar Mathieu Giraud

tests: stanford-germlines.should_get, testing '-c germlines'

parent 855470a5
!LAUNCH: (cd ../.. ; ./vidjil -c germlines data/Stanford_S22.fasta)
$ number of reads and kmers
1:13153 reads, 3020179 kmers
$ k-mers, IGHV
1:13148 .* 1832628 .*IGHV
$ k-mers, IGHJ
1:5 .* 407486 .*IGHJ
$ k-mers, ambiguous
1:98749 .*\?
$ k-mers, unknown
1:618185 .*_
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