vidjil.cpp: Revert path removing from germlines.

Reverts partially commit 9e7678b9.

vidjil.cpp: Revert path removing from germlines.
Reverts partially commit 9e7678b9.
8fb9d286 · Mathieu Giraud · a090d69c · 8fb9d286
Commit 8fb9d286 authored Oct 16, 2014 by Mathieu Giraud
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algo/vidjil.cpp algo/vidjil.cpp +0 -6

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--- a/algo/vidjil.cpp
+++ b/algo/vidjil.cpp
@@ -463,12 +463,6 @@ int main (int argc, char **argv)
        output_segmented = true;
        break;
      }
-      
-    //remove germline path
-    string tmp_germline_system ;
-    stringstream stream(germline_system);
-    while( getline(stream, tmp_germline_system, '/') )
-        germline_system = tmp_germline_system;

  // If there was no -w option, then w is either DEFAULT_W or DEFAULT_W_D
  if (w == 0)