Commit 8fb9d286 authored by Mathieu Giraud's avatar Mathieu Giraud

vidjil.cpp: Revert path removing from germlines.

Reverts partially commit 9e7678b9.
parent a090d69c
......@@ -463,12 +463,6 @@ int main (int argc, char **argv)
output_segmented = true;
break;
}
//remove germline path
string tmp_germline_system ;
stringstream stream(germline_system);
while( getline(stream, tmp_germline_system, '/') )
germline_system = tmp_germline_system;
// If there was no -w option, then w is either DEFAULT_W or DEFAULT_W_D
if (w == 0)
......
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