Commit 8f5043ac authored by Mathieu Giraud's avatar Mathieu Giraud

tests: update tests, remove '-x' option

parent b87015e3
!LAUNCH: ../../vidjil -k 14 -w 50 -c clones -G ../../germline/IGH -x -r 1 -d ../../data/clones_simul.fa
!LAUNCH: ../../vidjil -k 14 -w 50 -c clones -G ../../germline/IGH -y 3 -z 1 -r 1 -d ../../data/clones_simul.fa
$ Junction extractions
1:found 25 50-windows in 66 segments
......
!LAUNCH: ../../vidjil -k 14 -w 50 -c clones -G ../../germline/IGH -x -r 1 -n 5 -d ../../data/clones_simul.fa
!LAUNCH: ../../vidjil -k 14 -w 50 -c clones -G ../../germline/IGH -y 3 -z 1 -r 1 -n 5 -d ../../data/clones_simul.fa
$ Window extractions
1:found 25 50-windows in 66 segments
......
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