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Commit 8cc2eb24 authored by Mathieu Giraud's avatar Mathieu Giraud
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tests: update tests

Now the '-c segment' option only displays the (fine) segmentation on the best (kmer) germline.
This test is not useful anymore, but the two other tests of the same file are even stronger.
parent be1c678e
......@@ -12,8 +12,5 @@ $ First sequence, easy segmentation (no error, few deletions at the windows, sma
# -2/CTTC/-3 -1/GTTA/5
1:^>seq1 \\+ VDJ 0 72 77 89 94 139 IGHV5-10-1.0[1-4] 2/CTTC/3 IGHD1-14.01 1/GTTA/5 IGHJ5.01
$ Do not manage to segment on TRG
2:TRG: unable to segment
$ seq1_polyT is the same as seq1 but starts and ends with 10Ts, the recombination is in the middle. start position should not be 0 and end position should not be length-1
f1:^>seq1_polyT \\+ VDJ 10 82 87 99 104 149 IGHV5-10-1.0[1-4] 2/CTTC/3 IGHD1-14.01 1/GTTA/5 IGHJ5.01
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