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Commit 8a7a3c83 authored by Mathieu Giraud's avatar Mathieu Giraud

tests: update and add tests

parent c694636a
!LAUNCH: $VIDJIL_DIR/vidjil $VIDJIL_DEFAULT_OPTIONS -A -g $VIDJIL_DIR/data/chimera-fake-VJ-germlines.data -i $VIDJIL_DIR/data/chimera-fake-VJ.fa
!LAUNCH: $VIDJIL_DIR/vidjil $VIDJIL_DEFAULT_OPTIONS -A -g $VIDJIL_DIR/data/chimera-fake-VJ.germlines -i $VIDJIL_DIR/data/chimera-fake-VJ.fa
# Testing a custom (fake) germlines.data
$ Report the species
1: Fake .123.
$ Loads from 'chimera-fake-VJ-germlines.data' a custom germline
1: Y-.* l14 k13
......
{
"species": "Fake",
"species_taxon_id": 123,
"systems": {
"Y-Vb/Jg": {
"shortcut": "y",
"description": "Fake chimera locus",
......@@ -26,4 +30,5 @@
"seed": "12s"
}
}
}
}
\ No newline at end of file
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