Commit 7d1e0689 authored by Mathieu Giraud's avatar Mathieu Giraud

core/segment.{h,cpp}: remove 'code_light'

This was not used since at least one year.
parent 285d3bd6
......@@ -845,10 +845,6 @@ FineSegmenter::FineSegmenter(Sequence seq, Germline *germline, Cost segment_c,
"/" + string_of_int(del_J) +
" " + germline->rep_3.label(best_J);
code_light = germline->rep_5.label(best_V) +
"/ " + germline->rep_3.label(best_J);
info = string_of_int(Vend + FIRST_POS) + " " + string_of_int(Jstart + FIRST_POS) ;
finishSegmentation();
}
......@@ -932,10 +928,6 @@ void FineSegmenter::FineSegmentD(Germline *germline, double evalue_threshold, in
"/" + string_of_int(del_J) +
" " + germline->rep_3.label(best_J);
code_light = germline->rep_5.label(best_V) +
"/ " + germline->rep_4.label(best_D) +
"/ " + germline->rep_3.label(best_J);
finishSegmentationD();
}
}
......
......@@ -110,7 +110,6 @@ protected:
Germline *segmented_germline;
string label;
string code;
string code_light;
string info; // .vdj.fa header, fixed fields
string info_extra; // .vdj.fa header, other information, at the end of the header
int best_V, best_J ;
......
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