From 7aaa26fd50082f25e62ac0d24e5669a47f6a1e3e Mon Sep 17 00:00:00 2001 From: Mikael Salson Date: Wed, 3 Dec 2014 11:46:27 +0100 Subject: [PATCH] germline.cpp: Recombinations are INTRON/KDE Not the opposite ;) --- algo/core/germline.cpp | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/algo/core/germline.cpp b/algo/core/germline.cpp index 824c1636f..6d20aab26 100644 --- a/algo/core/germline.cpp +++ b/algo/core/germline.cpp @@ -190,10 +190,10 @@ void MultiGermline::build_incomplete_set(string path) // IGK: KDE, INTRON - germline = new Germline("IGK", 'k', path + "/IGKV.fa", "", path + "/IGK-INTRON.fa", -10, 80); + germline = new Germline("IGK", 'k', path + "/IGKV.fa", "", path + "/IGK-KDE.fa", -10, 80); germline->new_index("#####-#####"); germlines.push_back(germline); - germline = new Germline("IGK", 'k', path + "/IGK-KDE.fa", "", path + "/IGK-INTRON.fa", -10, 80); + germline = new Germline("IGK", 'k', path + "/IGK-INTRON.fa", "", path + "/IGK-KDE.fa", -10, 80); germline->new_index("#####-#####"); germlines.push_back(germline); -- GitLab