Skip to content
GitLab
Projects
Groups
Snippets
Help
Loading...
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
vidjil
Project overview
Project overview
Details
Activity
Releases
Repository
Repository
Files
Commits
Branches
Tags
Contributors
Graph
Compare
Issues
1,712
Issues
1,712
List
Boards
Labels
Service Desk
Milestones
Merge Requests
87
Merge Requests
87
CI / CD
CI / CD
Pipelines
Jobs
Schedules
Operations
Operations
Incidents
Environments
Packages & Registries
Packages & Registries
Container Registry
Analytics
Analytics
CI / CD
Repository
Value Stream
Snippets
Snippets
Members
Members
Collapse sidebar
Close sidebar
Activity
Graph
Create a new issue
Jobs
Commits
Issue Boards
Open sidebar
vidjil
vidjil
Commits
6edd4e9f
Commit
6edd4e9f
authored
Aug 21, 2020
by
Mathieu Giraud
Browse files
Options
Browse Files
Download
Email Patches
Plain Diff
vidjil-algo: release 2020.08
see
#4457
parent
1630d5b0
Pipeline
#163511
passed with stage
in 11 seconds
Changes
3
Pipelines
3
Hide whitespace changes
Inline
Side-by-side
Showing
3 changed files
with
9 additions
and
2 deletions
+9
-2
algo/release
algo/release
+1
-1
doc/CHANGELOG
doc/CHANGELOG
+7
-0
doc/vidjil-algo.md
doc/vidjil-algo.md
+1
-1
No files found.
algo/release
View file @
6edd4e9f
2020.0
6
2020.0
8
doc/CHANGELOG
View file @
6edd4e9f
This changelog concerns vijil-algo, the algorithmic part (C++) of the Vidjil platform.
2020-08-XX The Vidjil Team
* Cleaned output, no .vdj.fa and seq/clone-*.fa by default, new options --out-vdjfa and --out-clone-files #4386 #4387
Pipelines should not rely on the format of the headers in the .vdj.fa file, but rather parse the .vidjil file #3795
* Extended test and support to g++ 10.1, while reworking the documentation on supported compilers !733
* Updated documentation
* Updated the functional test framework (tools/should.py) !669 !784, new and updated tests
2020-06-12 The Vidjil Team
* New report of 'start of V' and 'end of J' positions #2138, improving the productivity estimation #2142
This is based on a streamlined alignment for reverse sequences (core/segment.cpp) !706
...
...
doc/vidjil-algo.md
View file @
6edd4e9f
# vidjil-algo 2020.0
6
# vidjil-algo 2020.0
8
**Command-line manual**
*The Vidjil team (Mathieu, Mikaël, Aurélien, Florian, Marc, Tatiana and Rayan)*
...
...
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment