Commit 6c8cd852 authored by Mikaël Salson's avatar Mikaël Salson

BRI_IGH: Multiple possibilities

Depending on the scoring scheme.
parent e8362e16
#target 0746OC
>IGHV5-51*01 0/TCCGCCCTA/5 IGHD1-26*01 2/A/2 IGHJ3*02 [IGH]
# Both alleles are possible for IGHV. The *01 is slightly longer (2nt)
# but has 2 mutations instead of 1 for the *03.
>(IGHV5-51*01, IGHV5-51*03) 0/TCCGCCCTA/5 IGHD1-26*01 2/A/2 IGHJ3*02 [IGH]
TGGAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGT
AAGGGTTCTGGATACAGCTTTACCAGCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAG
TGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCCGTCCTTCCAAGGCCAGGTCACCATC
......@@ -68,7 +70,8 @@ TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGGTAAGCCCTATAGTGAGTCGTATTA
#target 874MK
>IGHV1-24*01 3/TGAGGAAGGGGG/7 IGHD6-6*01 1/0/9 IGHJ6*02 [IGH]
# End of V1-24*01 is Aga
>IGHV1-24*01 (3/TGAGGAAGGGGG/7, 0/GGAAGGGGG/7) IGHD6-6*01 1/0/9 IGHJ6*02 [IGH]
GTAAAACGACGGCCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAG
GTTTCCGGATACACCCTCACTGAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGG
ATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAGAAGTTCCAGGGCAGAGTCACCATGACC
......@@ -80,7 +83,8 @@ AAGCCCTATAGTGAGTCGTATTA
#target 899BR
>IGHV3-11*01 3/CGAGGGAGC/3 IGHD5-24*01 5/C/7 IGHJ6*03 [IGH]
# End of V3-11*01 is Aga
>IGHV3-11*01 (3/CGAGGGAGC/3, 0/GGGAGC/3) IGHD5-24*01 5/C/7 IGHJ6*03 [IGH]
TGGAGTCTGGGGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCT
TCAGTGAC
TACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGTGGT
......
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