Commit 683c17fe authored by Mathieu Giraud's avatar Mathieu Giraud
Browse files

model.js: defines c

parent ef0fe1d8
...@@ -1078,12 +1078,13 @@ changeCloneNotation: function(cloneNotationType) { ...@@ -1078,12 +1078,13 @@ changeCloneNotation: function(cloneNotationType) {
// compute size for each germlines of newOthers // compute size for each germlines of newOthers
virtual_clones = []; virtual_clones = [];
for (var pos = 0; pos < this.clones.length; pos++) { for (var pos = 0; pos < this.clones.length; pos++) {
if (this.clone(pos).isVirtual()) { var c = this.clone(pos)
if (c.isVirtual()) {
virtual_clones.push(pos); virtual_clones.push(pos);
} else if (this.clone(pos).isActive()) { } else if (c.isActive()) {
for (var sample = 0; sample < this.samples.number ; sample++) { for (var sample = 0; sample < this.samples.number ; sample++) {
for (var k = 0; k < this.clusters[pos].length; k++) { for (var k = 0; k < this.clusters[pos].length; k++) {
newOthers[this.clone(pos).germline][sample] -= this.clone(this.clusters[pos][k]).get('reads', sample); newOthers[c.germline][sample] -= this.clone(this.clusters[pos][k]).get('reads', sample);
} }
} }
} }
......
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