should-vdj-to-tap: The test succeeds only if UNSEG doesn't follow the searched pattern.

This doesn't prevent from testing unsegmented sequences
as the output is not UNSEG UNSEG (UNSEG will appear only once).

algo/tests/should-vdj-to-tap.py

@@ -64,6 +64,8 @@ def id_line_to_tap(l, tap_id):
     '''
     Parses lines such as:
     >TRDD2*01_1/AGG/1_TRDD3*01__TRD+ + VJ 	0 84 88 187	TRDD2*01 1/AGG/1 TRDD3*01  TRD+
+    or
+    >TRDV3*01_0//0_TRDJ4*01 ! + VJ	0 49 50 97       TRD UNSEG noisy
     and return a .tap line
     '''
 
@@ -83,14 +85,16 @@ def id_line_to_tap(l, tap_id):
             return ''
 
     tap = ''
+    should_not_found = (not should_pattern in result) \
+                       or (should_pattern + ' UNSEG' in result)
 
-    if not should_pattern in result:
+    if should_not_found:
         globals()['global_failed'] = True
         tap += 'not '
 
     tap += 'ok %d - %s' % (tap_id, should_pattern)
 
-    if not should_pattern in result:
+    if should_not_found:
         tap += ' - found instead ' + result
 
     return tap