Commit 56290579 authored by Mathieu Giraud's avatar Mathieu Giraud

vidjil.cpp: faster example in 'vidjil -h'

See #2634.
parent 90ddc68d
......@@ -263,7 +263,7 @@ void usage(char *progname, bool advanced)
<< " # including unexpected recombinations, analyzes CDR3)" << endl
<< " " << progname << " -c clones -g germline/homo-sapiens.g:IGH -3 data/Stanford_S22.fasta # (restrict to complete recombinations on the IGH locus)" << endl
<< " " << progname << " -c windows -g germline/homo-sapiens.g -2 -uu -U data/Stanford_S22.fasta # (detect the locus, splits all the reads into large files)" << endl
<< " " << progname << " -c segment -g germline/homo-sapiens.g -2 -3 data/Stanford_S22.fasta # (full analysis of each read, only for debug/testing)" << endl
<< " " << progname << " -c segment -g germline/homo-sapiens.g -2 -3 -X 50 data/Stanford_S22.fasta # (full analysis of each read, only for debug/testing, here on first 50 reads)" << endl
<< " " << progname << " -c germlines -g germline/homo-sapiens.g data/Stanford_S22.fasta # (statistics on the k-mers)" << endl
;
exit(1);
......
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