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vidjil
vidjil
Commits
4c1bd7be
Commit
4c1bd7be
authored
Sep 23, 2015
by
Mathieu Giraud
Browse files
tests: TODO on three 0000-nck .should-vdj tests
parent
e54b4f7d
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algo/tests/should-vdj-tests/0000-nck-TRD+.should-vdj.fa
View file @
4c1bd7be
>TRDD2_3/7/0_TRDD3
gcgGGTGGtGATGGCAAAGTGCCAAGGAAAGGGAAAAAGGAAGAAGAGGGTTTTTATACTGATGTGTTTCATTGTGCCTTCCCCCCCCTACTGGGGGAtACGCACAGTGCTACAAAACCTACAgAGACCTGTACAAAAACTGCAGGGGCAAAAGTGCCATTTCCCTGGGATATCCTCACCCTGGGTcCcaaa
# double DD non detecte
>TRDD2*01_0/4/3_TRDD3_0/2/3_TRDJ1*01
>TRDD2*01_0/4/3_TRDD3_0/2/3_TRDJ1*01
TODO
AgcgggtggtgatggcaaagtgccaaggaaagggaaaaaggaagaagagggtttttatactgatgTGTTTCATTGTGCCTTCCTACGTGAGGGGGATACGCCCCGATAAACTCATCTTTGGAAAAGGAACCCGTGTGACTGTGGAAC
# double DD non detecte
>TRAV29/DV5*01_3/8/3_TRDD2_1/0/3_TRDD3_0/0/2_TRDJ1
>TRAV29/DV5*01_3/8/3_TRDD2_1/0/3_TRDD3_0/0/2_TRDJ1
TODO
cattAggtAAAAATGaagatGGAAGATTCACTGTCTTCTTAAACAAAAGTGCCAAGCACCtctcTctGCACATTGTGCCCTCCCAGCCTGGAGACTCTGCAGTGTACTTCTGTGCAGCAACACCGAGATCCTAGGGGGATACgACCGATAAACTCATCTTTGGAAAAGGAACCCGTGTGACTGTGgAACa
\ No newline at end of file
algo/tests/should-vdj-tests/0000-nck-TRG.should-vdj.fa
View file @
4c1bd7be
>TRGV4_3/15/2_TRGJ1*01
GCGTCTTCTGTacTATGACTCCTACACCTCcaGCGTTGTGTTGGAATcaGGAATcaGCCCAGGGAAGTATGATACTTATGGAAGCACAAGGAAgAACTTGAGAATGATACTGCGAAATCTTATTGAAAATGACTCTGGAGTCTATTACTGTGCCACCTGGGATAAGGAGGGACATAAgATTATTATAAGAAACTCTTTGGCAGTGGAACAACACTGGTTGTCACAGGTA
>TRGV11_2/5/0_TRGJ1
TGGTGTACCaCTGTGCcTGCtgGaTTAGGCTCCTAGAATTATTATAAGAAACTCTTTGGCAGTGGAACAACACTGGTTGTCACAGGTaagtatcggaagaatacaacattccaaggtaatagagggaaagcaggaa
# arbitrage difficile
>TRGV10*01_14/18/1_TRGJ1*01
>TRGV10*01_14/18/1_TRGJ1*01
TODO
ATCCtttACcaTCaAGtCCGtAGAGAAAGAAGACAtGGCCGTttACTACtGtGCtACCGCtGGAgGtCCttACAAttAtTAtAAGAAACtCTttGGCAGTGGAACAACACtGGTtGTCACAGGTA
\ No newline at end of file
Vidjil Team
@vidjilteam
Mentioned in issue
#1678 (closed)
·
Nov 29, 2016
Mentioned in issue
#1678 (closed)
Mentioned in issue #1678
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