Commit 4a7d15cb authored by Mathieu Giraud's avatar Mathieu Giraud

controllers/segmenter.py: vidjil-algo

parent 2393c967
Pipeline #18105 passed with stage
in 3 seconds
......@@ -59,7 +59,7 @@ def segment_sequences(sequences):
config = config.replace( ' germline' ,germline_folder)
## commande complete
cmd = defs.DIR_VIDJIL + '/vidjil ' + ' -o ' + folder_path
cmd = defs.DIR_VIDJIL + '/vidjil-algo ' + ' -o ' + folder_path
cmd += ' ' + config + ' ' + file_path
## execute la commande vidjil
......
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