Commit 42a919a9 authored by Ryan Herbert's avatar Ryan Herbert Committed by Mikaël Salson

some dirty code to work for runs and sets

parent a12ba46c
......@@ -28,32 +28,39 @@ class SampleSetList():
group_config_names = get_config_names_select()
group_group_names = get_group_names_select()
# TODO remove this hack
if self.type == 'patient':
dedicated_fields = [
s_table.first_name.with_alias('first_name'),
s_table.last_name.with_alias('last_name'),
s_table.birth.with_alias('birth'),
]
groupby = [s_table.id, s_table.sample_set_id, s_table.first_name, s_table.last_name, s_table.birth, s_table.info, db.auth_user.last_name]
else:
dedicated_fields = [s_table.name.with_alias('name')]
groupby = [s_table.id, s_table.sample_set_id, s_table.name, s_table.info, db.auth_user.last_name],
self.result = []
print(db(
self.result = db(
(s_table.sample_set_id > 0) &
(s_table.creator == db.auth_user.id)
)._select(
).select(
s_table.id.with_alias('id'),
s_table.sample_set_id.with_alias('sample_set_id'),
s_table.first_name.with_alias('first_name'),
s_table.last_name.with_alias('last_name'),
s_table.birth.with_alias('birth'),
s_table.info.with_alias('info'),
db.auth_user.last_name.with_alias('creator'),
db.sequence_file.size_file.sum().with_alias('size'),
db.sequence_file.id.count().with_alias('file_count'),
db.anon_permission.name.with_alias('has_permission'),
group_configs,
group_config_ids,
group_config_names,
#group_group_names,
group_group_names,
*dedicated_fields,
left=left,
groupby= (s_table.id, s_table.sample_set_id, s_table.first_name, s_table.last_name, s_table.birth, s_table.info, db.auth_user.last_name),
groupby= groupby,
orderby = ~db[type].id,
limitby=(0,1),
cacheable=True
))
)
limitby = None
if page is not None and step is not None:
......
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