Commit 41fa5982 authored by Mathieu Giraud's avatar Mathieu Giraud

vidjil.cpp: --gz also output .affects.gz files

parent 2a55bc2e
Pipeline #216856 passed with stages
in 36 minutes and 46 seconds
......@@ -1142,7 +1142,7 @@ int main (int argc, char **argv)
ostream *out_segmented = NULL;
ostream *out_unsegmented = NULL;
ostream *out_unsegmented_detail[STATS_SIZE];
ofstream *out_affects = NULL;
ostream *out_affects = NULL;
WindowExtractor we(multigermline);
if (! output_sequences_by_cluster)
......@@ -1181,8 +1181,7 @@ int main (int argc, char **argv)
if (output_affects) {
string f_affects = out_dir + f_basename + AFFECTS_FILENAME ;
cout << " ==> " << f_affects << endl ;
out_affects = new ofstream(f_affects.c_str());
out_affects = new_ofgzstream(f_affects, out_gz);
we.setAffectsOutput(out_affects);
}
......
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