Commit 40e94451 authored by Mathieu Giraud's avatar Mathieu Giraud
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tests: update tests

This test should check whether the e-values are the same, and not their actual value.
parent 2e23e720
!LAUNCH: $LAUNCHER ../../vidjil -k 9 -G ../../germline/IGH -K -c clones ../../data/revcomp.fa ; grep 'X.X.X' out/revcomp.affects | sed 's/[^X]//g' | sort -u ; grep '#>' out/revcomp.affects | sed 's/.*SEG...//' | cut -f 1 -d' ' | uniq -c
!LAUNCH: $LAUNCHER ../../vidjil -k 9 -G ../../germline/IGH -K -c clones ../../data/revcomp.fa ; grep 'X.X.X' out/revcomp.affects | sed 's/[^X]//g' | sort -u ; grep '#>' out/revcomp.affects | sed 's/.*SEG...//' | cut -f 1 -d' ' | nl -bn -s 'evalue: ' | uniq -c
$ Segments both reads, normal and reverse
1:junction detected in 2 reads
......@@ -10,4 +10,4 @@ $ Only one window
1:==> found 1 ..-window
$ Same e-value for both reads
1: 2 1.954.*-59
1: 2 .* evalue: .[.].*e-..
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