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Commit 3ff57228 authored by Mathieu Giraud's avatar Mathieu Giraud
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should-vdj: BRI_TRB, sequences to be further worked out

parent ae4557bf
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Showing with 6 additions and 4 deletions
algo/tests/should-vdj-tests/BRI_TRB.should-vdj.fa
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......@@ -7,18 +7,20 @@ ggctcacggttacaggtaag
#target 0447GG
>TRBD2*02 1/AATG/0 TRBJ2-3*01 [TRB]
>TRBD2*02 1/AATG/0 TRBJ2-3*01 [TRB] BUG
CAGGGCTGAGCGAACACCGGGGAGCTGTTTTTTGGAGAAGGCTCTAGGCTGACCGTACTGGGTAAGGAGGCG
GTTGGGGCTCCGGAGAGCTCCGAGAGGGCGGGATGGGCAGAGGTAAGCAGCTGCCCCACTCTGAGAGGGGCT
GTGCTGAGAGGTTTTTCCAAGCCCCACACAGTCAGACTAACCTCTGCCACCTGCGCTTCCTGCCGCTGCCCA
GTGGTTGGGGGAGGGGGACTAGCAGGGAGGAAACATTTTTGTATCATGGTGTAACATTGTGGGGACTAGCGG
GAGGAATGAGCACAGATACGCAGTATTTTGGCCCAGGCACCCGGCTGACAGTGCTCGGTAAGCGGGGGCTCC
GAGG
AATG
AGCACAGATACGCAGTATTTTGGCCCAGGCACCCGGCTGACAGTGCTCGGTAAGCGGGGGCTCC
CGCTGAAGCCCCGGAACTGGGGAGGGGGCGCCCCGGGACGCCGGGGGCGTCGCAGGGCCAGTTTCTGTGCCT
T
#target 0465MB
>TRBD1*01 3/ATCCCG/0 TRBD2 4/0/4 TRBJ2-5*01 [TRB]
>TRBD1*01 3/ATCCCG/0 TRBD2 4/0/4 TRBJ2-5*01 [TRB] TODO
GCCAAACAGCCTTACAAAGACATCCAGCTCTAAGGAGCTCAAAACATCCTGAGGACAGTGCCTGGAGGTGAG
AAGGAAGCCCCCGGCCTGGTCCATACCCCACCACCAACTTGCATAATGGGGGGTGATGTCACCCACCCTCCA
CTCCCCTCAAAGGAGCAGCTGCTCTGGTGGTCTCTCCCAGGCTCTGGGGGCGGACCCATGGGAGGGGCTGTT
......@@ -27,7 +29,7 @@ AGGCACGCGGCTCCTGGTGCTCGGTGTGCGCG
#target 0639HA
>TRBV21-1*01 5/CGGGACTCCCCC/0 TRBD2*02 0/CCGGGGG/9 TRBJ2-7*01 [TRB]
>TRBV21-1*01 5/CGGGACTCCCCC/0 TRBD2*02 0/CCGGGGG/9 TRBJ2-7*01 [TRB] TODO
AGAACTTATTCAGAAAGCAGAAATAATCAATGAGCGATTTTTAGCCCAATGCTCCAAAAACTCATCCTGTAC
CTTGGAGATCCAGTCCACGGAGTCAGGGGACACAGCACTGTATTTCTGTGCCAGCAGCCGGGACTCCCCCGG
GACTAGCGGGAGGGCCGGGGGGCAGTACTTCGGGCCGGGCACCAGGCTCACGGTTACAGGTAAG
......
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