core/segment.cpp: output CDR3 status in .getInfoLine()

3a6c438e · Mathieu Giraud · 0e595eb9 · 3a6c438e
Commit 3a6c438e authored Feb 28, 2016 by Mathieu Giraud
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algo/core/segment.cpp algo/core/segment.cpp +4 -0

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--- a/algo/core/segment.cpp
+++ b/algo/core/segment.cpp
@@ -254,6 +254,10 @@ string Segmenter::getInfoLine() const
  if (evalue_right > NO_LIMIT_VALUE)
    s += "/" + scientific_string_of_double(evalue_right);

+  if (CDR3start > 0)
+    s += " {CDR3: " + string_of_int(CDR3start) + "(" + string_of_int(CDR3end-CDR3start+1) + ")" + string_of_int(CDR3end) + " "
+      + "up"[CDR3productive] + " " + JUNCTIONaa + " " + CDR3nuc + "}";
+
  return s ;
 }