Commit 348aa0ed authored by Mikaël Salson's avatar Mikaël Salson
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Update vidjil-format.md

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......@@ -274,13 +274,16 @@ some clones, and added external data (`data`).
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`Stock_order` and `order` fields defines the order in which the points should be considered.
The `stock_order` contain all the sample present and allow to remember position of each samples, hidden or not.
The `order` field allow to remember the currently actives samples to show.
In that case we should first consider the second point (whose `name`
The `stock_order` and `order` fields define the order in which the points should be considered.
* `stock_order` contains the order for all the existing samples and thus remembers positions of each samples, hidden or not.
* `order` only remembers the currently shown samples.
In the example above we should first consider the second point (whose `name`
is *fu1)* and the point to be considered in second should be the first one in
the file (whose `name` is *diag*).
If `order` value was `[1]`, only the second sample will be shown and the first will be hidden.
If `order` value was `[1]`, only the second sample would be shown and the first would be hidden.
In such a case `stock_order` should still contain two values.
The `clusters` field indicate clones (by their `id`) that have been further clustered.
Usually, these clones were defined in a related `.vidjil` file (as *clone2* and *clone3*,
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