From 25f4b24a4ba1e55f085aeee455aa80588b50407a Mon Sep 17 00:00:00 2001 From: Mikael Salson Date: Wed, 26 Sep 2018 21:23:20 +0200 Subject: [PATCH] user.md: Documentation on silent mutations --- doc/user.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/doc/user.md b/doc/user.md index ab0102f53..8a05faea3 100644 --- a/doc/user.md +++ b/doc/user.md @@ -164,7 +164,7 @@ or their “N length” (that is N1-D-N2 in the case of VDJ recombinations). The sequence view displays nucleotide sequences from selected clones. - See "[What is the sequence displayed for each clone ?](#what-is-the-sequence-displayed-for-each-clone)" below - - Sequences can be aligned together (“align” button), identifying substitutions, insertions and deletions. + - Sequences can be aligned together (“align” button), identifying substitutions, insertions and deletions. Silent mutations are identified, as soon as a CDR3 is detected, and represented with a double border in blue. - You can remove sequences from the aligner (and the selection) by clicking on the “X” at the left. - You can further analyze the sequences with IMGT/V-QUEST, IgBlast or Blast. This opens another window/tab. - You can unselect all sequences by clicking on the background of the grid. -- GitLab