Commit 1e13b968 authored by Mathieu Giraud's avatar Mathieu Giraud

tests: add and update tests

see also should#31
parent 7364857c
Pipeline #66634 passed with stages
in 173 minutes and 5 seconds
!LAUNCH: $VIDJIL_DIR/$EXEC $VIDJIL_DEFAULT_OPTIONS --hello reads 2>&1
!EXIT_CODE: 109
$ Unknown option
1:error.* --hello
$ Refer to online help and documentation
1:run with -h
1:see doc/vidjil-algo.md
......@@ -5,6 +5,9 @@
$ Error, no germlines
1:error.* one germline must be given
$ Refer to documentation
1:see doc/vidjil-algo.md
......
......@@ -7,6 +7,6 @@ $ Warning in json output
1: "code": "W20", "level": "warn", "msg": "Very few V.D.J recombinations found: 0.00."
$ Link to documentation
1:vidjil-algo.md
3:vidjil-algo.md
......@@ -5,4 +5,4 @@ $ Warning, -z
1:WARNING
$ Link to documentation
1:vidjil-algo.md
2:vidjil-algo.md
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