remove unused code

server/web2py/applications/vidjil/models/sample_set_list.py

@@ -95,106 +95,7 @@ class SampleSetList():
                 orderby = ~db[type].id
             )
 
-
-        step = len(query_gss) if step is None else step
-        auth.load_permissions(PermissionEnum.admin.value, type)
-        auth.load_permissions(PermissionEnum.anon.value, type)
-        self.elements = {}
-        for row in query_gss:
-            if (tags is not None and len(tags) > 0):
-                key = row[type]
-            else:
-                key = row
-            self.elements[key.id] = key
-            self.elements[key.id].file_count = 0
-            self.elements[key.id].size = 0
-            self.elements[key.id].conf_list = []
-            self.elements[key.id].conf_id_list = [-1]
-            self.elements[key.id].most_used_conf = ""
-            self.elements[key.id].groups = ""
-            self.elements[key.id].group_list = []
-            #self.elements[key.id].has_permission = auth.can_modify_sample_set(key.sample_set_id)
-            self.elements[key.id].has_permission = auth.can_modify_subset(type, key.id)
-            self.elements[key.id].anon_allowed = auth.can_view_info(type, key.id)
-
-        self.element_ids = self.elements.keys()
-
-    def load_creator_names(self):
-        query_creator = db(
-            (db[self.type].creator == db.auth_user.id)
-            & (db[self.type].id.belongs(self.element_ids))
-        ).select(
-            db[self.type].id, db.auth_user.last_name
-        )
-        for i, row in enumerate(query_creator) :
-            self.elements[row[self.type].id].creator = row.auth_user.last_name
-
-    def load_sample_information(self):
-        query_sample = db(
-            (db.sample_set_membership.sample_set_id == db[self.type].sample_set_id)
-            &(db.sequence_file.id == db.sample_set_membership.sequence_file_id)
-            &(db[self.type].id.belongs(self.element_ids))
-        ).select(
-            db[self.type].id, db.sequence_file.size_file
-        )
-         
-        for i, row in enumerate(query_sample) :
-            self.elements[row[self.type].id].file_count += 1
-            self.elements[row[self.type].id].size += row.sequence_file.size_file
-
-    def load_config_information(self):
-        query = db(
-            (db[self.type].sample_set_id == db.fused_file.sample_set_id) &
-            (db.fused_file.config_id == db.config.id) &
-            (auth.vidjil_accessible_query(PermissionEnum.read_config.value, db.config) |
-                auth.vidjil_accessible_query(PermissionEnum.admin_config.value, db.config) ) &
-            (db[self.type].id.belongs(self.element_ids))
-        ).select(
-            db[self.type].id, db.config.name, db.config.id, db.fused_file.fused_file
-        )
-
-        for i, row in enumerate(query) :
-            self.elements[row[self.type].id].conf_list.append(
-                    {'id': row.config.id, 'name': row.config.name, 'fused_file': row.fused_file.fused_file})
-            self.elements[row[self.type].id].conf_id_list.append(row.config.id)
-
-        for key, row in self.elements.iteritems():
-            row.most_used_conf = max(set(row.conf_id_list), key=row.conf_id_list.count)
-            row.confs = ", ".join(list(set(map(lambda elem: elem['name'], row.conf_list)))) 
-
-    def load_permitted_groups(self):
-        query = db(
-            ((db[self.type].id == db.auth_permission.record_id) | (db.auth_permission.record_id == 0)) &
-            (db.auth_permission.table_name == self.type) &
-            (db.auth_permission.name == PermissionEnum.access.value) &
-            (db.auth_group.id == db.auth_permission.group_id)
-            & (db[self.type].id.belongs(self.element_ids))
-        ).select(
-            db[self.type].id, db.auth_group.role, db.auth_group.id
-        )
-        for i, row in enumerate(query) :
-            self.elements[row[self.type].id].group_list.append(row.auth_group.role.replace('user_','u'))
-
-        for key, row in self.elements.iteritems():
-            row.groups = ", ".join(filter(lambda g: g != 'admin', set(row.group_list)))
-
-    def load_anon_permissions(self):
-        query = db(
-            (db.auth_permission.name == "anon") &
-            (db.auth_permission.table_name == self.type) &
-            (db[self.type].id == db.auth_permission.record_id ) &
-            (db.auth_group.id == db.auth_permission.group_id ) &
-            (db.auth_membership.user_id == auth.user_id) &
-            (db.auth_membership.group_id == db.auth_group.id) &
-            (db[self.type].id.belongs(self.element_ids))
-        ).select(
-            db[self.type].id
-        )
-        for i, row in enumerate(query) :
-            self.elements[row.id].anon_allowed = True
-
-    def get_values(self):
-        return self.elements.values()
+        self.result = query_gss
 
     def __len__(self):
         return len(self.element_ids)