core/segment.cpp: the FineSegmenter segments the MAX_12 pseudo-germline
For the MAX_12 pseudo-germline, the FineSegmenter now calls override_rep5_rep3_from_labels, and then continue by the regular way. Note that IKmerStore:getLabel() returns *one* Fasta file, even when several files were used for the same KmerAffect, such as in TRD+ or IGK+. In these cases, the FineSegmenter will probably fail when the bad Fasta file is returned.
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