Nous avons procédé ce jeudi matin 08 avril 2021 à une MAJ de sécurité urgente. Nous sommes passé de la version 13.9.3 à la version 13.9.5 les releases notes correspondantes sont ici:
https://about.gitlab.com/releases/2021/03/17/security-release-gitlab-13-9-4-released/
https://about.gitlab.com/releases/2021/03/31/security-release-gitlab-13-10-1-released/

Commit 13251649 authored by marc duez's avatar marc duez Committed by Mathieu Giraud

aligner_sequence.js : start/stop AA sequence at begining of V/end of J

parent add71f3f
......@@ -254,10 +254,18 @@ Sequence.prototype = {
var i = start%3;
if (clone.hasSeg('5') && typeof clone.seg['5'].start != undefined)
while (i+3 <= clone.seg['5'].start)
i = i+3;
var end = seq.length;
if (cdr3aa != "" && cdr3aa.indexOf("#") != -1)
end = start +3 *cdr3aa.indexOf("#") ;
if (clone.hasSeg('3') && typeof clone.seg['3'].stop != undefined)
while (end > clone.seg['3'].stop)
end = end-3;
var code;
while (i<end){
code = seq[i]+seq[i+1]+seq[i+2];
......@@ -271,6 +279,10 @@ Sequence.prototype = {
start2 = stop +1 -((cdr3aa.length - cdr3aa.indexOf("#")-1)*3);
end = seq.length;
if (clone.hasSeg('3') && typeof clone.seg['3'].stop != undefined)
while (end > clone.seg['3'].stop)
end = end-3;
while (i<start2){
this.seqAA[i] = '#';
i++;
......
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