Commit 102b2e6e authored by Marc Duez's avatar Marc Duez
Browse files
parents a1cf1fec b5d04576
{
"vidjil_json_version": "2014.09",
"custom": [],
"cluster": [],
"samples": {
"names": [
"plop",
"Fu1.data",
"Fu2.data",
"Fu3.data",
"Fu4.data",
"Fu5.data",
"Fu6.data",
"Fu7.data"
],
"order": [
0,
1,
2,
3,
4,
5,
6,
7
]
}
}
\ No newline at end of file
This diff is collapsed.
This changelog concerns the algorithmic part (C++) of Vidjil.
2014-10-XX The Vidjil Team
2014-10-22 The Vidjil Team
* Streamlined filtering options (-r/-y/-z), better documented (doc/algo.org)
* Streamlined output files (xxxxxxxxxx)
* Updated .data .json output, now in the stable 2014.10 format (documented in doc/format-analysis.org)
* Streamlined output files, option to fix their basename (-b)
* Updated .data .json output, now in the better documented 2014.10 format (doc/format-analysis.org)
* New experimental multi-germline analysis (-g). This will be improved and documented in a next release.
* Faster FineSegmenter with a better memory allocation (core/dynprog.cpp)
* Refactored main vidjil.cpp, objects storing germlines and statistics (core/germline.cpp, core/stats.cpp)
* Transferred clustering from clone output to information in .data, again simplifying vidjil.cpp
* Removed unused code parts as well as some files
* New and updated unit and functional tests
* Bugs closed
2014-09-23 The Vidjil Team
......
......@@ -91,7 +91,7 @@ present in the .vidjil file.
#+BEGIN_SRC js
"producer": "", // arbitrary string, user/software/options producing this file [required]
"timestamp": "", // last modification date [required]
"vidjil_json_version": "2014.10draft", // version of the format [required]
"vidjil_json_version": "2014.10", // version of the format [required]
#+END_SRC
......
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