Commit 0aeb0777 authored by Mathieu Giraud's avatar Mathieu Giraud
Browse files

controllers/default.py: update default configurations

These configs are the base configs used on the public server.
They should be included in any new install.
parent 5700724d
......@@ -74,17 +74,32 @@ def init_db_helper(force=False):
db.auth_membership.insert(user_id=id_first_user, group_id=id_sa_group)
db.auth_membership.insert(user_id=id_first_user, group_id=id_public_group)
##création des configs de base
id_config_TRG = db.config.insert(
## base Vidjil configs
db.config.insert(
name = 'multi+inc+xxx',
command = '-c clones -3 -z 100 -r 1 -g germline -i -e 1 -2 -d -w 50 ',
info = 'multi-locus, with some incomplete/unusual/unexpected recombinations'
)
db.config.insert(
name = 'multi+inc',
command = '-c clones -3 -z 100 -r 1 -g germline -e 1 -w 50 ',
info = 'multi-locus, with some incomplete/unusual recombinations'
)
db.config.insert(
name = 'multi',
command = '-c clones -3 -z 100 -r 1 -g germline -i -e 1 -d -w 50 ',
info = 'multi-locus'
)
db.config.insert(
name = 'TRG',
command = '-c clones -z 100 -R 1 -r 1 -G germline/TRG ',
info = 'default trg config'
command = '-c clones -3 -z 100 -r 1 -G germline/TRG ',
info = 'TRG, VgJg'
)
id_config_IGH = db.config.insert(
db.config.insert(
name = 'IGH',
command = '-c clones -d -z 100 -R 1 -r 1 -G germline/IGH ',
info = 'default igh config'
command = '-c clones -w 60 -d -3 -z 100 -r 1 -G germline/IGH ',
info = 'IGH, Vh(Dh)Jh'
)
## permission
......
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