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  • Mikaël Salson's avatar
    chimera.should-get: We segment again on IGL by chance · 17056853
    Mikaël Salson authored
    This is due to the Aho-Corasick automaton where we now have an index load for
    the V gene and for the J gene. There is only one matching kmer from IGLJ but
    that's enough to have an evalue < 1 because the index load for IGLJ is very
    low and because there are only two reads in the dataset.
    
    We could put a -e 1e-1 on the command line to make the test pass. Would this
    be hacky or not?
    17056853