chimera-fake-D.should-get 449 Bytes
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!LAUNCH: $VIDJIL_DIR/vidjil $VIDJIL_DEFAULT_OPTIONS -A -g $VIDJIL_DIR/germline -2 $VIDJIL_DIR/data/chimera-fake-D.fa

$ The KmerSegmenter segments the chimera reads on PSEUDO_MAX12 germline (-2)
f1:xxx .* -> .* 2

$ The FineSegmenter gives the locus information (-2)
f1:Unexpected [+]IGHD/[+]TRBJ
f1:Unexpected [+]TRAV/[+]TRDD

$ The FineSegmenter correclty segments the V-D and D-J sequences (-2)
f1:IGHD1-1.01--TRBJ1-1.01
f1:TRAV1-1.01--TRDD3.01