get-germline 369 Bytes
Newer Older
Mikaël Salson's avatar
Mikaël Salson committed
1 2 3
#!/bin/sh

cd $(dirname $0)
Mathieu Giraud's avatar
Mathieu Giraud committed
4
wget -O - http://www.imgt.org/download/GENE-DB/IMGTGENEDB-ReferenceSequences.fasta-nt-WithoutGaps-F+ORF+inframeP | python split-from-imgt.py 
Mikaël Salson's avatar
Mikaël Salson committed
5

Marc Duez's avatar
Marc Duez committed
6
python buildBrowserGermline.py *.fa germlines.data ../browser/js/germline.js
7 8


9 10
wget -N http://rbx.vidjil.org/browser/germline/IGK-INTRON.fa
wget -N http://rbx.vidjil.org/browser/germline/IGK-KDE.fa