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Nous avons procédé ce jeudi matin 08 avril 2021 à une MAJ de sécurité urgente. Nous sommes passé de la version 13.9.3 à la version 13.9.5 les releases notes correspondantes sont ici:
https://about.gitlab.com/releases/2021/03/17/security-release-gitlab-13-9-4-released/
https://about.gitlab.com/releases/2021/03/31/security-release-gitlab-13-10-1-released/

Commit 7682976d authored by Berenger Bramas's avatar Berenger Bramas
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remove BenchEfficiency

parent c370ea26
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Addons/BenchEfficiency/execAllHomogeneous.sh deleted 100644 → 0
View file @ c370ea26
#!/bin/bash
echo "Perform the computation for :"
echo "$SCALFMM_NB particles"
echo "$SCALFMM_H tree height"
echo "Up to $SCALFMM_MAX_NB_CPU CPUs"
echo ""
echo "Using granularities:"
echo "$SCALFMM_BS_CPU_SEQ and $SCALFMM_BS_CPU_PAR"
# only in seq with the seq bs
cpu=1
STARPU_NCPUS=$cpu
STARPU_NCUDA=0
logoutput=`./Tests/Release/testBlockedUniformBench -nb $SCALFMM_NB -h $SCALFMM_H -bs $SCALFMM_BS_CPU_SEQ`
if [[ $VERBOSE ]] ; then
echo $logoutput
fi
$TUTORIAL_STARPU_DIR/bin/starpu_fxt_tool -i "/tmp/prof_file_"$USER"_0"
rec_name="$SCALFMM_RES_DIR/trace-nb_$SCALFMM_NB-h_$SCALFMM_H-bs_$SCALFMM_BS_CPU_SEQ-CPU_$cpu.rec"
mv trace.rec $rec_name
python $TUTORIAL_STARPU_DIR/bin/starpu_trace_state_stats.py -t $rec_name > $rec_name.time
for (( cpu=1 ; cpu<=$SCALFMM_MAX_NB_CPU ; cpu++)) ; do
echo ">> CPU = $cpu"
STARPU_NCPUS=$cpu
STARPU_NCUDA=0
logoutput=`./Tests/Release/testBlockedUniformBench -nb $SCALFMM_NB -h $SCALFMM_H -bs $SCALFMM_BS_CPU_PAR`
if [[ $VERBOSE ]] ; then
echo $logoutput
fi
$TUTORIAL_STARPU_DIR/bin/starpu_fxt_tool -i "/tmp/prof_file_"$USER"_0"
rec_name="$SCALFMM_RES_DIR/trace-nb_$SCALFMM_NB-h_$SCALFMM_H-bs_$SCALFMM_BS_CPU_PAR-CPU_$cpu.rec"
mv trace.rec $rec_name
python $TUTORIAL_STARPU_DIR/bin/starpu_trace_state_stats.py -t $rec_name > $rec_name.time
done
Addons/BenchEfficiency/mergetimefile.cpp deleted 100644 → 0
View file @ c370ea26
#include <vector>
#include <unordered_map>
#include <unordered_set>
#include <string>
#include <cassert>
#include <sstream>
#include <cstring>
template <class VariableType>
inline VariableType StrToOther(const std::string& str, const VariableType& defaultValue = VariableType(), bool* hasWorked = nullptr){
std::istringstream iss(str,std::istringstream::in);
VariableType value = defaultValue;
iss >> value;
if(hasWorked){
if(!iss.eof()){
char c;
iss >> c;
(*hasWorked) = (c == '\n' || c == '\0');
}
else{
(*hasWorked) = true;
}
}
if( /*iss.tellg()*/ iss.eof() ) return value;
return defaultValue;
}
std::string ReduceName(const std::string name){
const std::vector<std::pair<std::string,std::string>> mapping=
{ {"M2M-level", "M2M"} , {"M2L-level", "M2L"} , {"M2L-out-level", "M2L-out"} ,
{"L2L-level", "L2L"} };
for(const std::pair<std::string,std::string> mp : mapping){
if(name.substr(0, mp.first.length()) == mp.first){
return mp.second;
}
}
return name;
}
struct LineData{
std::string name;
int nb;
std::string type;
double duration;
LineData(const char line[]){
std::vector<std::string> words;
{
int start = 0;
int end = 1;
while(line[end] != '\0'){
while(line[end] != '\0'
&& line[end] != ','){
end += 1;
}
if(line[end] != '\0'){
words.push_back(std::string(&line[start], end-start));
end += 1;
start = end;
}
}
if(start != end){
words.push_back(std::string(&line[start], end-start));
}
}
if(words.size() != 4){
printf("Error line is no composed of 4 words, has %lu for %s\n", words.size(), line);
exit(111);
}
name = ReduceName(words[0].substr(1, words[0].size() - 2));
bool hasWorked = false;
nb = StrToOther<int>(words[1], -1, &hasWorked);
if(hasWorked == false){
printf("Error cannot get nb val\n");
exit(112);
}
type = words[2].substr(1, words[2].size() - 2);
duration = StrToOther<double>(words[3], 0, &hasWorked);
if(hasWorked == false){
printf("Error cannot get duration val\n");
exit(112);
}
}
};
struct TimeData{
TimeData()
: tt(0), tr(0), ti(0){
}
double tt; // time in task
double tr; // time in runtime
double ti; // time idle
};
/*
"Name","Count","Type","Duration"
"Initializing",24,"Runtime",1.259594
"Overhead",6304,"Runtime",150.667381
"Idle",1635,"Other",2.964436
"Scheduling",3285,"Runtime",50.173307
"Sleeping",330,"Other",10978.895357
"FetchingInput",1611,"Runtime",2.834788
"execute_on_all_wrapper",48,"Task",60.98058
"PushingOutput",1611,"Runtime",49.857017
"P2P-out",403,"Task",3840.070231
"Callback",1447,"Runtime",0.459004
"P2M",49,"Task",7759.555381
"M2M-level-5",49,"Task",916.867961
"M2L-level-5",7,"Task",3866.40312
"M2M-level-4",7,"Task",90.183757
"M2L-out-level-5",32,"Task",809.783766
"P2P",49,"Task",28378.015095
"L2L-level-5",49,"Task",749.115965
"M2L-level-6",49,"Task",33069.582498
"M2L-out-level-6",806,"Task",10014.65321
"L2P",49,"Task",10532.198512
"Deinitializing",24,"Runtime",0.600177
"M2L-level-3",1,"Task",45.115451
"M2L-level-2",1,"Task",2.638928
"L2L-level-2",1,"Task",1.343462
"L2L-level-4",7,"Task",87.756298
"L2L-level-3",1,"Task",10.658414
"M2M-level-3",1,"Task",11.480571
"M2M-level-2",1,"Task",1.41104
"M2L-level-4",1,"Task",511.345345
*/
int main(int argc, char** argv){
if(argc != 4){
printf("Error usage is:\n"
"%s seq_file parallel_file%%d nb_threads\n",
argv[0]);
return 200;
}
printf("seq file is %s\n", argv[1]);
printf("parallel file are %s\n", argv[2]);
const int nbThreads = StrToOther<int>(argv[3], -1);
if(nbThreads == 1){
printf("Error cannot convert nb threads\n");
return 201;
}
printf("up to %d threads\n", nbThreads);
std::vector<std::unordered_map<std::string,double>> timeTasks;
std::unordered_set<std::string> allTaskNames;
std::vector<TimeData> times;
for(int idxFile = 0 ; idxFile <= nbThreads ; ++idxFile){
char filename[1024];
if(idxFile == 0){
strncpy(filename, argv[1], 1024);
}
else{
sprintf(filename, argv[2], idxFile);
}
timeTasks.emplace_back();
times.emplace_back();
printf("Open file : %s\n", filename);
FILE* timeFile = fopen(filename, "r");
if(timeFile == NULL){
printf("Cannot open file %s\n", filename);
return 99;
}
size_t sizeLine = 1024;
char* line = (char*)malloc(sizeLine);
{// Read header
if((sizeLine = getline((char**)&line, &sizeLine, timeFile)) == -1){
printf("Cannot read header\n");
return 1;
}
// Should be: "Name","Count","Type","Duration"
if(strcmp("\"Name\",\"Count\",\"Type\",\"Duration\"\n",
line) != 0){
printf("Header is incorrect\n");
return 2;
}
}
while((sizeLine = getline((char**)&line, &sizeLine, timeFile)) != -1){
if(strncmp(line, "WARNING", 7) != 0){
LineData dt(line);
// Task, Runtime, Other
if(dt.type == "Task"){
if(dt.name != "execute_on_all_wrapper"){
timeTasks[idxFile][dt.name] += dt.duration;
allTaskNames.insert(dt.name);
times[idxFile].tt += dt.duration;
}
}
else if(dt.type == "Runtime"){
if(dt.name == "Scheduling"
|| dt.name == "FetchingInput"
|| dt.name == "PushingOutput"){
times[idxFile].tr += dt.duration;
}
}
else if(dt.type == "Other"){
if(dt.name == "Idle"){
times[idxFile].ti += dt.duration;
}
}
else {
printf("Arg do not know type %s\n", dt.type.c_str());
//return 3;
}
}
}
fclose(timeFile);
}
// Global efficiencies
{
// Manually set seq idel and runtime
times[0].ti = 0;
times[0].tr = 0;
times[1].ti = 0;
times[1].tr = 0;
printf("Create global-eff.data\n");
FILE* resFile = fopen("global-eff.data", "w");
assert(resFile);
fprintf(resFile, "0 \tgranularity-eff \ttasks-eff \truntime-eff \tpipeline-eff\n");
for(int idx = 1; idx <= nbThreads ; ++idx){
fprintf(resFile, "%d \t%e \t%e \t%e \t%e\n",
idx,
times[0].tt/times[idx].tt,
times[1].tt/times[idx].tt,
times[idx].tt/(times[idx].tt+times[idx].tr),
(times[idx].tt+times[idx].tr)/(times[idx].tt+times[idx].tr+times[idx].ti));
}
fclose(resFile);
}
// Global efficiencies
{
printf("Create task-eff.data\n");
FILE* resFile = fopen("task-eff.data", "w");
assert(resFile);
fprintf(resFile, "0 ");
for(const std::string tsk : allTaskNames){
fprintf(resFile, "\t%s ", tsk.c_str());
}
fprintf(resFile, "\n");
for(int idx = 1; idx <= nbThreads ; ++idx){
fprintf(resFile, "%d", idx);
for(const std::string tsk : allTaskNames){
fprintf(resFile, "\t%e ", timeTasks[1][tsk]/timeTasks[idx][tsk]);
}
fprintf(resFile, "\n");
}
fclose(resFile);
}
{
printf("Create task-gr-eff.data\n");
FILE* resFile = fopen("task-gr-eff.data", "w");
assert(resFile);
fprintf(resFile, "0 ");
for(const std::string tsk : allTaskNames){
fprintf(resFile, "\t%s ", tsk.c_str());
}
fprintf(resFile, "\n");
for(int idx = 1; idx <= nbThreads ; ++idx){
fprintf(resFile, "%d", idx);
for(const std::string tsk : allTaskNames){
fprintf(resFile, "\t%e ", timeTasks[0][tsk]/timeTasks[idx][tsk]);
}
fprintf(resFile, "\n");
}
fclose(resFile);
}
return 0;
}
Addons/BenchEfficiency/paintmodel.fmm.colors deleted 100644 → 0
View file @ c370ea26
#expression evaluation;replacement (if not empty);red;green;blue
P2P;;1.0;1.0;1.0
P2P-out;;0.7;0.7;0.7
(M2L-level-)[0-9]*;;0.2;0.2;0.6
(M2L-out-level-)[0-9]*;;0.1;0.1;0.6
(L2L-level-)[0-9]*;;0.2;0.6;0.2
(M2M-level-)[0-9]*;;0.1;0.6;0.6
P2M;;0.2;0.2;0.2
L2P;;0.6;0.8;0.2
Addons/BenchEfficiency/scalfmmExtractKey.sh deleted 100644 → 0
View file @ c370ea26
#!/bin/bash
if [[ $# -ne 1 ]] ; then
echo "You must pass a key as parameter"
return
fi
input=$(cat)
res=`echo "$input" | grep "$1" | cut -d'=' -f2 | cut -d' ' -f2`
echo $res
Addons/BenchEfficiency/scalfmmFindBs.gplot deleted 100644 → 0
View file @ c370ea26
#!/usr/bin/gnuplot
reset
set terminal png
set output filename . '.png'
set xlabel "bs"
set ylabel "time (s)"
set title "Bs"
set grid
set style data linespoints
plot "<sort -g -k1 benchBs.data" using 1:2 title "Example"
Addons/BenchEfficiency/scalfmmFindBs.sh deleted 100644 → 0
View file @ c370ea26
#!/bin/bash
function GetExecTime() {
>&2 echo "[LOG] Exec $1 $2"
local res_output=`$1 "$2"`
>&2 echo "[LOG] Try to find $3"
local time_result=`echo "$res_output" | grep "$3" | cut -d'=' -f2 | cut -d's' -f1`
if [[ $VERBOSE ]] ; then
>&2 echo "[LOG] output : $res_output"
fi
>&2 echo "[LOG] Done in $time_result"
echo $time_result
}
function isLower() {
awk -v n1=$1 -v n2=$2 'BEGIN{ if (n1<n2) exit 0; exit 1}'
}
function getMin(){
if isLower $1 $2 ; then
echo $1
else
echo $2
fi
}
if [[ "$#" -ne "3" ]] ; then
echo "Error you must provide 3 parameters:"
echo "$0 test-commnand-line starting-bs ending-bs"
return
fi
echo "You ask to find the best bs for:"
echo "Command: $1"
echo "From $2 to $3"
echo "STARPU_NCPUS = $STARPU_NCPUS"
echo "STARPU_NCUDA = $STARPU_NCUDA"
outputfile=./benchBs.data
echo "# BS TIME" > $outputfile
left_bs="$2"
left_exec_time=`GetExecTime "$1" "$left_bs" "@EXEC TIME"`
echo "$left_bs $left_exec_time" >> $outputfile
best_bs=$left_bs
best_exec_time="$left_exec_time"
right_bs="$3"
right_exec_time=`GetExecTime "$1" "$right_bs" "@EXEC TIME"`
echo "$right_bs $right_exec_time" >> $outputfile
if isLower $right_exec_time $best_exec_time ; then
best_bs=$right_bs
best_exec_time="$right_exec_time"
fi
for (( depth=0; depth<10; depth++ ))
do
if [[ $left_bs -ge $right_bs ]] ; then
break;
fi
>&2 echo "[LOG] Depth $depth ..."
sub_left_bs=$(( ($right_bs-$left_bs)/3 + $left_bs ))
sub_left_exec_time=`GetExecTime "$1" "$sub_left_bs" "@EXEC TIME"`
echo "$sub_left_bs $sub_left_exec_time" >> $outputfile
if isLower $sub_left_exec_time $best_exec_time ; then
best_bs=$sub_left_bs
best_exec_time="$sub_left_exec_time"
fi
sub_right_bs=$(( 2*($right_bs-$left_bs)/3 + $left_bs ))
sub_right_exec_time=`GetExecTime "$1" "$sub_right_bs" "@EXEC TIME"`
echo "$sub_right_bs $sub_right_exec_time" >> $outputfile
if isLower $sub_right_exec_time $best_exec_time ; then
best_bs=$sub_right_bs
best_exec_time="$sub_right_exec_time"
fi
min_from_left=`getMin $left_exec_time $sub_left_exec_time`
min_from_right=`getMin $right_exec_time $sub_right_exec_time`
if isLower $min_from_left $min_from_right ; then
right_bs=$sub_right_bs
right_exec_time="$sub_right_exec_time"
else
left_bs=$sub_left_bs
left_exec_time="$sub_left_exec_time"
fi
done
echo "@BEST BS = $best_bs (in = $best_exec_time s)"
Addons/BenchEfficiency/scalfmmPlotAll.gplot deleted 100644 → 0
View file @ c370ea26
#!/usr/bin/gnuplot
reset
set terminal png
set output filename . '.png'
set xlabel "Nb Threads"
set ylabel "Efficiency"
set grid
set style data linespoints
N = system("awk 'NR==1{print NF}' " . filename . ".data")
set key outside;
set key right top;
set key autotitle columnhead
do for [col=2:N:1] {
set style line col lw 3
}
plot for [col=2:N:1] filename . '.data' using 1:col with lp
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