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Attention une mise à jour du serveur va être effectuée le vendredi 16 avril entre 12h et 12h30. Cette mise à jour va générer une interruption du service de quelques minutes.

Commit 16d02f1c authored by Martin Khannouz's avatar Martin Khannouz Committed by Berenger Bramas
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Add jobs to run uniform and simple mpi.

parent fd0ccc61
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Showing with 111 additions and 6 deletions
jobs/explicit_chebyshev.sh
View file @ 16d02f1c
......@@ -34,8 +34,6 @@ echo "Tree height: " $TREE_HEIGHT >> $FINAL_DIR/stdout
echo "Group size: " $GROUP_SIZE >> $FINAL_DIR/stdout
echo "Algorithm: explicit" >> $FINAL_DIR/stdout
echo "Total particles: " $NB_PARTICLE >> $FINAL_DIR/stdout
srun hostname -s| sort -u > mpd.hosts
export I_MPI_FABRICS=shm:dapl
mpiexec.hydra -f mpd.hosts -n $NB_NODE $NUMACTL ./Build/Tests/Release/testBlockedMpiChebyshev -nb $NB_PARTICLE -bs $GROUP_SIZE -h $TREE_HEIGHT -no-validation >> $FINAL_DIR/stdout 2>&1
mpiexec -n $NB_NODE $NUMACTL ./Build/Tests/Release/testBlockedMpiChebyshev -nb $NB_PARTICLE -bs $GROUP_SIZE -h $TREE_HEIGHT -no-validation >> $FINAL_DIR/stdout 2>&1
source $HOME/move_trace.sh
jobs/explicit_uniform.sh 0 → 100644
View file @ 16d02f1c
#!/usr/bin/env bash
## name of job
#SBATCH -J explicit
#SBATCH -p special
## Resources: (nodes, procs, tasks, walltime, ... etc)
#SBATCH -c 24
#SBATCH --time=00:30:00
#SBATCH --exclusive
# # output error message
#SBATCH -e explicit_%j.err
#SBATCH --mail-type=END,FAIL,TIME_LIMIT --mail-user=martin.khannouz@inria.fr
## modules to load for the job
source $HOME/env.sh
## variable for the job
export TREE_HEIGHT=6
export NB_NODE=$SLURM_JOB_NUM_NODES
export STARPU_NCPU=24
export STARPU_FXT_PREFIX=$SLURM_JOB_ID
export FINAL_DIR="`pwd`/dir_$SLURM_JOB_ID"
export STARPU_COMM_STATS=1
export STARPU_WATCHDOG_TIMEOUT=20000000
export STARPU_WATCHDOG_CRASH=1
export STARPU_GENERATE_TRACE=0
export STARPU_SILENT=1
export STARPU_MPI_COMM=1
NUMACTL="numactl --interleave=all"
mkdir $FINAL_DIR
echo "my jobID: " $SLURM_JOB_ID > $FINAL_DIR/stdout
echo "Model: cube" >> $FINAL_DIR/stdout
echo "Nb node: " $NB_NODE >> $FINAL_DIR/stdout
echo "Nb thread: " $STARPU_NCPU >> $FINAL_DIR/stdout
echo "Tree height: " $TREE_HEIGHT >> $FINAL_DIR/stdout
echo "Group size: " $GROUP_SIZE >> $FINAL_DIR/stdout
echo "Algorithm: explicit_uniforme" >> $FINAL_DIR/stdout
echo "Total particles: " $NB_PARTICLE >> $FINAL_DIR/stdout
mpiexec -n $NB_NODE $NUMACTL ./Build/Tests/Release/testBlockedMpiUniform -nb $NB_PARTICLE -bs $GROUP_SIZE -h $TREE_HEIGHT >> $FINAL_DIR/stdout 2>&1
source $HOME/move_trace.sh
jobs/implicit_chebyshev.sh
View file @ 16d02f1c
......@@ -34,8 +34,6 @@ echo "Tree height: " $TREE_HEIGHT >> $FINAL_DIR/stdout
echo "Group size: " $GROUP_SIZE >> $FINAL_DIR/stdout
echo "Algorithm: implicit" >> $FINAL_DIR/stdout
echo "Total particles: " $NB_PARTICLE >> $FINAL_DIR/stdout
srun hostname -s| sort -u > mpd.hosts
export I_MPI_FABRICS=shm:dapl
mpiexec.hydra -f mpd.hosts -n $NB_NODE $NUMACTL ./Build/Tests/Release/testBlockedImplicitChebyshev -nb $NB_PARTICLE -bs $GROUP_SIZE -h $TREE_HEIGHT -no-validation >> $FINAL_DIR/stdout 2>&1
mpiexec -n $NB_NODE $NUMACTL ./Build/Tests/Release/testBlockedImplicitChebyshev -nb $NB_PARTICLE -bs $GROUP_SIZE -h $TREE_HEIGHT -no-validation >> $FINAL_DIR/stdout 2>&1
source $HOME/move_trace.sh
jobs/implicit_uniform.sh 0 → 100644
View file @ 16d02f1c
#!/usr/bin/env bash
## name of job
#SBATCH -J implicit
#SBATCH -p special
## Resources: (nodes, procs, tasks, walltime, ... etc)
#SBATCH -c 24
#SBATCH --time=0-00:30:00
#SBATCH --exclusive
# # output error message
#SBATCH -e implicit_%j.err
#SBATCH --mail-type=END,FAIL,TIME_LIMIT --mail-user=martin.khannouz@inria.fr
## modules to load for the job
source $HOME/env.sh
## variable for the job
export TREE_HEIGHT=6
export NB_NODE=$SLURM_JOB_NUM_NODES
export STARPU_NCPU=24
export STARPU_FXT_PREFIX=$SLURM_JOB_ID
export FINAL_DIR="`pwd`/dir_$SLURM_JOB_ID"
export STARPU_COMM_STATS=1
export STARPU_WATCHDOG_TIMEOUT=20000000
export STARPU_WATCHDOG_CRASH=0
export STARPU_GENERATE_TRACE=0
export STARPU_SILENT=1
export STARPU_MPI_COMM=1
NUMACTL="numactl --interleave=all"
mkdir $FINAL_DIR
echo "my jobID: " $SLURM_JOB_ID > $FINAL_DIR/stdout
echo "Model: cube" >> $FINAL_DIR/stdout
echo "Nb node: " $NB_NODE >> $FINAL_DIR/stdout
echo "Nb thread: " $STARPU_NCPU >> $FINAL_DIR/stdout
echo "Tree height: " $TREE_HEIGHT >> $FINAL_DIR/stdout
echo "Group size: " $GROUP_SIZE >> $FINAL_DIR/stdout
echo "Algorithm: implicit_uniforme" >> $FINAL_DIR/stdout
echo "Total particles: " $NB_PARTICLE >> $FINAL_DIR/stdout
mpiexec -n $NB_NODE $NUMACTL ./Build/Tests/Release/testBlockedImplicitUniform -nb $NB_PARTICLE -bs $GROUP_SIZE -h $TREE_HEIGHT >> $FINAL_DIR/stdout 2>&1
source $HOME/move_trace.sh
jobs/simple_mpi.sh 0 → 100644
View file @ 16d02f1c
#!/usr/bin/env bash
## name of job
#SBATCH -J implicit
#SBATCH -p special
## Resources: (nodes, procs, tasks, walltime, ... etc)
#SBATCH -c 24
#SBATCH --time=0-00:30:00
#SBATCH --exclusive
# # output error message
#SBATCH -e implicit_%j.err
#SBATCH --mail-type=END,FAIL,TIME_LIMIT --mail-user=martin.khannouz@inria.fr
## modules to load for the job
source $HOME/env.sh
## variable for the job
export TREE_HEIGHT=8
export NB_NODE=$SLURM_JOB_NUM_NODES
export FINAL_DIR="`pwd`/dir_$SLURM_JOB_ID"
NUMACTL="numactl --interleave=all"
mkdir $FINAL_DIR
echo "my jobID: " $SLURM_JOB_ID > $FINAL_DIR/stdout
echo "Model: cube" >> $FINAL_DIR/stdout
echo "Nb node: " $NB_NODE >> $FINAL_DIR/stdout
echo "Nb thread: " $STARPU_NCPU >> $FINAL_DIR/stdout
echo "Tree height: " $TREE_HEIGHT >> $FINAL_DIR/stdout
echo "Group size: 1" >> $FINAL_DIR/stdout
echo "Algorithm: simple-mpi" >> $FINAL_DIR/stdout
echo "Total particles: " $NB_PARTICLE >> $FINAL_DIR/stdout
mpiexec -n $NB_NODE $NUMACTL ./Build/Tests/Release/testFmmAlgorithmThreadProc -nb $NB_PARTICLE -h $TREE_HEIGHT >> $FINAL_DIR/stdout 2>&1
source $HOME/move_trace.sh
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