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Commit 0502d064 authored by PIACIBELLO Cyrille's avatar PIACIBELLO Cyrille
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Merge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/scalfmm/scalfmm

parents 9492479d e0bf4435
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Addons/CKernelApi/Src/CKernelApi.h
View file @ 0502d064
// ===================================================================================
// Logiciel initial: ScalFmm Version 0.5
// Co-auteurs : Olivier Coulaud, Bérenger Bramas.
// Propriétaires : INRIA.
// Copyright © 2011-2012, diffusé sous les termes et conditions d’une licence propriétaire.
// Initial software: ScalFmm Version 0.5
// Co-authors: Olivier Coulaud, Bérenger Bramas.
// Owners: INRIA.
// Copyright © 2011-2012, spread under the terms and conditions of a proprietary license.
// Copyright ScalFmm 2014 I
// This software is a computer program whose purpose is to compute the FMM.
//
// This software is governed by the CeCILL-C and LGPL licenses and
// abiding by the rules of distribution of free software.
//
// This program is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
// GNU General Public and CeCILL-C Licenses for more details.
// "http://www.cecill.info".
// "http://www.gnu.org/licenses".
// ===================================================================================
//
#ifndef CKERNELAPI_H
#define CKERNELAPI_H
......@@ -31,7 +36,7 @@ typedef void* Scalfmm_Handle;
//< it gives the level of the cell, its morton index, it position in term of box at that level
//< and the spatial position of its center
typedef void* (*Callback_init_cell)(int level, long long morton_index, int* tree_position, double* spatial_position);
//< Function to destroy what have bee initalized by the user (should be give in Scalfmm_dealloc_handle)
//< Function to destroy what have bee initialized by the user (should be give in Scalfmm_dealloc_handle)
typedef void (*Callback_free_cell)(void*);
//< This function init an handle (and an tree based on the given properties)
......@@ -41,7 +46,7 @@ void Scalfmm_dealloc_handle(Scalfmm_Handle handle, Callback_free_cell cellDestro
//< This function should be used to insert an array of particle in the tree
//< The indexes are the one used on the particles operator
//< The posision of the particles should be composed of one triple per particle:
//< The position of the particles should be composed of one triple per particle:
//< xyzxyzxyz...
void Scalfmm_insert_array_of_particles(Scalfmm_Handle handle, int nbParticles, int* particleIndexes, double* particleXYZ);
//< To insert one particle only
......
Addons/CKernelApi/Src/ScalfmmCKernelApiCore.cpp
View file @ 0502d064
// ===================================================================================
// Logiciel initial: ScalFmm Version 0.5
// Co-auteurs : Olivier Coulaud, Bérenger Bramas.
// Propriétaires : INRIA.
// Copyright © 2011-2012, diffusé sous les termes et conditions d’une licence propriétaire.
// Initial software: ScalFmm Version 0.5
// Co-authors: Olivier Coulaud, Bérenger Bramas.
// Owners: INRIA.
// Copyright © 2011-2012, spread under the terms and conditions of a proprietary license.
// Copyright ScalFmm 2014 I
// This software is a computer program whose purpose is to compute the FMM.
//
// This software is governed by the CeCILL-C and LGPL licenses and
// abiding by the rules of distribution of free software.
//
// This program is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
// GNU General Public and CeCILL-C Licenses for more details.
// "http://www.cecill.info".
// "http://www.gnu.org/licenses".
// ===================================================================================
//
#include "../../Src/Containers/FOctree.hpp"
#include "../../Src/Containers/FVector.hpp"
......@@ -156,10 +161,10 @@ typedef FFmmAlgorithmThread<OctreeClass, CoreCell, CoreContainerClass, CoreKerne
// Our scalfmm handle
struct ScalFmmCoreHandle {
struct ScalFmmCoreConfig {
//paramètres en lecture/écriture :
int treeHeight; // hombre de niveaux de l'arbre (int)
FReal boxWidth; // taille de la boîte racine (FReal)
FPoint boxCenter; // position du centre de la boîte racine (FReal[3])
// Read/Write parameter
int treeHeight; // Number of level in the octree
FReal boxWidth; // Simulation box size (root level)
FPoint boxCenter; // Center position of the box simulation(FReal[3])
};
ScalFmmCoreConfig config;
......
Bench/NaCL/FMM_PER_DIRECT.out.ori 0 → 100644
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# PerSize DOMAIN_SIZE ENERGY
-1 64 0.0288 4.35095270585633e+00
0 128 0.143855 2.95927632466761e+00
1 256 0.545394 4.29096123695206e+00
2 512 3.92982 4.62535195665754e+00
3 1024 28.8061 4.70904628870072e+00
4 2048 228.941 4.72997598521508e+00
5 4096 1314.65 4.73521031144200e+00
6 8192 14236.2 4.73650962794840e+00
7 16384 113172 4.73674022925353e+00
CMakeLists.txt
View file @ 0502d064
......@@ -44,7 +44,6 @@ MESSAGE(STATUS " CXX ${CMAKE_CXX_COMPILER_ID}" )
# Options
OPTION( ScalFMM_USE_BLAS "Set to ON to build ScaFMM with BLAS" OFF )
OPTION( ScalFMM_USE_FFT "Set to ON to build ScaFMM with FFTW" OFF )
OPTION( ScalFMM_USE_TRACE "Set to ON to print trace or use itac trace" OFF )
OPTION( ScalFMM_BUILD_TESTS "Set to ON to build functionalities Tests" OFF )
OPTION( ScalFMM_BUILD_UTESTS "Set to ON to build UTests" OFF )
OPTION( ScalFMM_BUILD_DEBUG "Set to ON to build in Debug" OFF )
......@@ -162,16 +161,7 @@ if( ScalFMM_ATTACHE_SOURCE )
# ADD_DEFINITIONS(-g)
SET(ScaLFMM_CXX_FLAGS "${ScaLFMM_CXX_FLAGS} -g")
endif(ScalFMM_ATTACHE_SOURCE)
##############################################################################
# Trace #
##############################################################################
MESSAGE( STATUS "ScalFMM_USE_TRACE = ${ScalFMM_USE_TRACE}" )
if( ScalFMM_USE_TRACE )
OPTION( ScalFMM_USE_ITAC "Set to ON to use itac trace" OFF )
if( ScaLFMM_USE_ITAC )
ADD_DEFINITIONS(-I$VT_ROOT/include -trace)
endif()
endif()
##############################################################################
# Blas option #
##############################################################################
......
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\documentclass{minimal}
\usepackage{tikz}
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\end{tikzpicture}
\end{document}
\ No newline at end of file
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<path id='gpPt7' stroke-width='0.222' stroke='currentColor' d='M0,-1.33 L-1.33,0.67 L1.33,0.67 z'/>
<use xlink:href='#gpPt7' id='gpPt8' fill='currentColor' stroke='none'/>
<use xlink:href='#gpPt7' id='gpPt9' stroke='currentColor' transform='rotate(180)'/>
<use xlink:href='#gpPt9' id='gpPt10' fill='currentColor' stroke='none'/>
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<use xlink:href='#gpPt11' id='gpPt12' fill='currentColor' stroke='none'/>
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<g style="fill:none; color:white; stroke:currentColor; stroke-width:1.00; stroke-linecap:butt; stroke-linejoin:miter">
</g>
<g style="fill:none; color:black; stroke:currentColor; stroke-width:1.00; stroke-linecap:butt; stroke-linejoin:miter">
<path stroke='black' d='M80.2,422.4 L89.2,422.4 M575.0,422.4 L566.0,422.4 '/> <g transform="translate(71.9,426.9)" style="stroke:none; fill:black; font-family:Arial; font-size:12.00pt; text-anchor:end">
<text> 0</text>
</g>
<path stroke='black' d='M80.2,354.8 L89.2,354.8 M575.0,354.8 L566.0,354.8 '/> <g transform="translate(71.9,359.3)" style="stroke:none; fill:black; font-family:Arial; font-size:12.00pt; text-anchor:end">
<text> 1000</text>
</g>
<path stroke='black' d='M80.2,287.2 L89.2,287.2 M575.0,287.2 L566.0,287.2 '/> <g transform="translate(71.9,291.7)" style="stroke:none; fill:black; font-family:Arial; font-size:12.00pt; text-anchor:end">
<text> 2000</text>
</g>
<path stroke='black' d='M80.2,219.5 L89.2,219.5 M575.0,219.5 L566.0,219.5 '/> <g transform="translate(71.9,224.0)" style="stroke:none; fill:black; font-family:Arial; font-size:12.00pt; text-anchor:end">
<text> 3000</text>
</g>
<path stroke='black' d='M80.2,151.9 L89.2,151.9 M575.0,151.9 L566.0,151.9 '/> <g transform="translate(71.9,156.4)" style="stroke:none; fill:black; font-family:Arial; font-size:12.00pt; text-anchor:end">
<text> 4000</text>
</g>
<path stroke='black' d='M80.2,84.3 L89.2,84.3 M575.0,84.3 L566.0,84.3 '/> <g transform="translate(71.9,88.8)" style="stroke:none; fill:black; font-family:Arial; font-size:12.00pt; text-anchor:end">
<text> 5000</text>
</g>
<path stroke='black' d='M80.2,16.7 L89.2,16.7 M575.0,16.7 L566.0,16.7 '/> <g transform="translate(71.9,21.2)" style="stroke:none; fill:black; font-family:Arial; font-size:12.00pt; text-anchor:end">
<text> 6000</text>
</g>
<path stroke='black' d='M80.2,422.4 L80.2,413.4 M80.2,16.7 L80.2,25.7 '/> <g transform="translate(80.2,444.9)" style="stroke:none; fill:black; font-family:Arial; font-size:12.00pt; text-anchor:middle">
<text>-5</text>
</g>
<path stroke='black' d='M162.7,422.4 L162.7,413.4 M162.7,16.7 L162.7,25.7 '/> <g transform="translate(162.7,444.9)" style="stroke:none; fill:black; font-family:Arial; font-size:12.00pt; text-anchor:middle">
<text> 0</text>
</g>
<path stroke='black' d='M245.1,422.4 L245.1,413.4 M245.1,16.7 L245.1,25.7 '/> <g transform="translate(245.1,444.9)" style="stroke:none; fill:black; font-family:Arial; font-size:12.00pt; text-anchor:middle">
<text> 5</text>
</g>
<path stroke='black' d='M327.6,422.4 L327.6,413.4 M327.6,16.7 L327.6,25.7 '/> <g transform="translate(327.6,444.9)" style="stroke:none; fill:black; font-family:Arial; font-size:12.00pt; text-anchor:middle">
<text> 10</text>
</g>
<path stroke='black' d='M410.1,422.4 L410.1,413.4 M410.1,16.7 L410.1,25.7 '/> <g transform="translate(410.1,444.9)" style="stroke:none; fill:black; font-family:Arial; font-size:12.00pt; text-anchor:middle">
<text> 15</text>
</g>
<path stroke='black' d='M492.5,422.4 L492.5,413.4 M492.5,16.7 L492.5,25.7 '/> <g transform="translate(492.5,444.9)" style="stroke:none; fill:black; font-family:Arial; font-size:12.00pt; text-anchor:middle">
<text> 20</text>
</g>
<path stroke='black' d='M575.0,422.4 L575.0,413.4 M575.0,16.7 L575.0,25.7 '/> <g transform="translate(575.0,444.9)" style="stroke:none; fill:black; font-family:Arial; font-size:12.00pt; text-anchor:middle">
<text> 25</text>
</g>
</g>
<g style="fill:none; color:gray; stroke:currentColor; stroke-width:1.00; stroke-linecap:butt; stroke-linejoin:miter">
<path stroke='gray' stroke-dasharray=' 2,4' d='M162.7,422.4 L162.7,16.7 '/></g>
<g style="fill:none; color:black; stroke:currentColor; stroke-width:1.00; stroke-linecap:butt; stroke-linejoin:miter">
<path stroke='black' d='M80.2,16.7 L80.2,422.4 L575.0,422.4 M575.0,16.7 M80.2,16.7 '/> <g transform="translate(17.6,219.6) rotate(270)" style="stroke:none; fill:black; font-family:Arial; font-size:12.00pt; text-anchor:middle">
<text>Number of leaves</text>
</g>
<g transform="translate(327.6,471.9)" style="stroke:none; fill:black; font-family:Arial; font-size:12.00pt; text-anchor:middle">
<text>Number of Particles</text>
</g>
</g>
<g id="gnuplot_plot_1" ><title>gnuplot_plot_1</title>
<g style="fill:none; color:red; stroke:currentColor; stroke-width:1.00; stroke-linecap:butt; stroke-linejoin:miter">
<g style = 'stroke:none; shape-rendering:crispEdges'>
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<polygon fill = 'red' points = '212.6,422.4 213.5,422.4 213.5,235.2 212.6,235.2 '/>
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<polygon fill = 'red' points = '262.0,422.4 263.0,422.4 263.0,71.6 262.0,71.6 '/>
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<polygon fill = 'red' points = '443.5,422.4 444.4,422.4 444.4,422.1 443.5,422.1 '/>
<polygon fill = 'red' points = '476.5,422.4 477.4,422.4 477.4,422.2 476.5,422.2 '/>
<polygon fill = 'red' points = '492.9,422.4 493.9,422.4 493.9,422.2 492.9,422.2 '/>
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</g>
</g>
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<path stroke='black' d='M80.2,16.7 L80.2,422.4 L575.0,422.4 M575.0,16.7 M80.2,16.7 '/></g>
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Doc/Stages/ebauche/tex/clean.sh 0 → 100755
View file @ 0502d064
#!/bin/sh
rm *.pdf_tex
rm *.pdf
Examples/generateDistributions.cpp
View file @ 0502d064
......@@ -222,11 +222,9 @@ int main(int argc, char ** argv){
extraRadius = FParameters::getValue(argc,argv,"-extraLength", 0.0);
BoxWith += 2*extraRadius ;
}
bool binaryMode = false;
std::string name(genericFileName);
if( FParameters::existParameter(argc, argv, "-bin")){
binaryMode = true;
name += ".bfma";
}
else {
......
Src/AdaptiveTree/FAdaptChebSymKernel.hpp
View file @ 0502d064
......@@ -16,7 +16,7 @@
// ===================================================================================
#include "Utils/FGlobal.hpp"
#include "Utils/FTrace.hpp"
#include "Utils/FPoint.hpp"
#include "Adaptative/FAdaptiveCell.hpp"
......
Src/AdaptiveTree/FAdaptSeqAlgorithm.hpp
View file @ 0502d064
......@@ -20,7 +20,7 @@
#include "Utils/FGlobal.hpp"
#include "Utils/FAssert.hpp"
#include "Utils/FLog.hpp"
#include "Utils/FTrace.hpp"
#include "Utils/FTic.hpp"
#include "Containers/FOctree.hpp"
......@@ -70,9 +70,7 @@ public:
* To execute the fmm algorithm
* Call this function to run the complete algorithm
*/
void execute(const unsigned operationsToProceed = FFmmNearAndFarFields){
FTRACE( FTrace::FFunction functionTrace(__FUNCTION__, "Fmm" , __FILE__ , __LINE__) );
void execute(const unsigned operationsToProceed = FFmmNearAndFarFields){
if(operationsToProceed & FFmmP2M) bottomPass();
if(operationsToProceed & FFmmM2M) upwardPass();
......@@ -90,8 +88,7 @@ private:
/////////////////////////////////////////////////////////////////////////////
/** P2M */
void bottomPass(){
FTRACE( FTrace::FFunction functionTrace(__FUNCTION__, "Fmm" , __FILE__ , __LINE__) );
void bottomPass(){
FLOG( FLog::Controller.write("\tStart Bottom Pass\n").write(FLog::Flush) );
FLOG(FTic counterTime);
FLOG(FTic computationCounter);
......@@ -125,8 +122,7 @@ private:
/////////////////////////////////////////////////////////////////////////////
/** M2M */
void upwardPass(){
FTRACE( FTrace::FFunction functionTrace(__FUNCTION__, "Fmm" , __FILE__ , __LINE__) );
void upwardPass(){
FLOG( FLog::Controller.write("\tStart Upward Pass\n").write(FLog::Flush); );
FLOG(FTic counterTime);
FLOG(FTic computationCounter);
......@@ -205,9 +201,7 @@ private:
/////////////////////////////////////////////////////////////////////////////
/** M2L */
void transferPass(){
FTRACE( FTrace::FFunction functionTrace(__FUNCTION__, "Fmm" , __FILE__ , __LINE__) );
void transferPass(){
FLOG( FLog::Controller.write("\tStart Downward Pass (M2L)\n").write(FLog::Flush); );
FLOG(FTic counterTime);
FLOG(FTic computationCounter);
......@@ -299,8 +293,7 @@ private:
/////////////////////////////////////////////////////////////////////////////
/** L2L */
void downardPass(){
FTRACE( FTrace::FFunction functionTrace(__FUNCTION__, "Fmm" , __FILE__ , __LINE__) );
void downardPass(){
FLOG( FLog::Controller.write("\tStart Downward Pass (L2L)\n").write(FLog::Flush); );
FLOG(FTic counterTime);
FLOG(FTic computationCounter );
......@@ -360,8 +353,7 @@ private:
/////////////////////////////////////////////////////////////////////////////
/** P2P */
void directPass(){
FTRACE( FTrace::FFunction functionTrace(__FUNCTION__, "Fmm" , __FILE__ , __LINE__) );
void directPass(){
FLOG( FLog::Controller.write("\tStart Direct Pass\n").write(FLog::Flush); );
FLOG(FTic counterTime);
FLOG(FTic computationCounterL2P);
......
Src/AdaptiveTree/FAdaptUnifKernel.hpp
View file @ 0502d064
......@@ -16,7 +16,7 @@
// ===================================================================================
#include "Utils/FGlobal.hpp"
#include "Utils/FTrace.hpp"
#include "Utils/FPoint.hpp"
#include "Adaptative/FAdaptiveCell.hpp"
......
Src/Components/FTestKernels.hpp
View file @ 0502d064
......@@ -22,7 +22,7 @@
#include "FAbstractKernels.hpp"
#include "../Containers/FOctree.hpp"
#include "../Utils/FGlobal.hpp"
#include "../Utils/FTrace.hpp"
/**
......