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Commit 71d7cb71 authored by GILLES Sebastien's avatar GILLES Sebastien
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#1292 Rename the third party wrappers from Seldon to Xtensor. Remove some unused functions

parent 4cad8acc
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MoReFEM.xcodeproj/project.pbxproj
View file @ 71d7cb71
......@@ -819,9 +819,6 @@
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......@@ -1220,9 +1217,6 @@
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......@@ -1477,6 +1471,8 @@
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......@@ -3704,9 +3700,6 @@
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......@@ -4293,9 +4286,6 @@
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BE9FE84318CE0A6900177F79 /* SeldonFunctions.hpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.h; path = SeldonFunctions.hpp; sourceTree = "<group>"; };
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......@@ -4647,6 +4637,9 @@
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......@@ -9270,7 +9263,7 @@
BE9FE81C18CE0A6900177F79 /* Parmetis */,
BE9FE82218CE0A6900177F79 /* Petsc */,
BE8B5F7620778CB100DC005E /* Tclap */,
BE9FE84118CE0A6900177F79 /* Seldon */,
BEE45C142358E2C300E0AB7C /* Xtensor */,
);
path = Wrappers;
sourceTree = "<group>";
......@@ -9355,19 +9348,6 @@
path = Exceptions;
sourceTree = "<group>";
};
BE9FE84118CE0A6900177F79 /* Seldon */ = {
isa = PBXGroup;
children = (
BE9FE84218CE0A6900177F79 /* SeldonFunctions.cpp */,
BE9FE84318CE0A6900177F79 /* SeldonFunctions.hpp */,
BE9FE84418CE0A6900177F79 /* SeldonFunctions.hxx */,
BE4ED3191A2CBAC400DE374E /* MatrixOperations.cpp */,
BE4ED31A1A2CBAC400DE374E /* MatrixOperations.hpp */,
BE4ED31B1A2CBAC400DE374E /* MatrixOperations.hxx */,
);
path = Seldon;
sourceTree = "<group>";
};
BEA05F5A17E2164B0014DAED /* Exceptions */ = {
isa = PBXGroup;
children = (
......@@ -10370,6 +10350,16 @@
name = Snes;
sourceTree = "<group>";
};
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isa = PBXGroup;
children = (
BEE45C152358E2C300E0AB7C /* SourceList.cmake */,
BEE45C172358E2C300E0AB7C /* Functions.cpp */,
BEE45C162358E2C300E0AB7C /* Functions.hpp */,
);
path = Xtensor;
sourceTree = "<group>";
};
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isa = PBXGroup;
children = (
......@@ -11346,7 +11336,6 @@
BE90E1951A24929A00CCAFDE /* TimeKeep.hpp in Headers */,
BE53FC331E0D86B900C5D6F5 /* Subtuple.hxx in Headers */,
BEDEB9211C3C073100B1C71B /* Enum.hpp in Headers */,
BE4ED31E1A2CBAC400DE374E /* MatrixOperations.hxx in Headers */,
BE90E1671A24926E00CCAFDE /* Print.hpp in Headers */,
BEDEB9371C3C078A00B1C71B /* InputData.hxx in Headers */,
BE41A8CB1A24AA46004E4312 /* Mpi.hxx in Headers */,
......@@ -11369,12 +11358,10 @@
BE110E911E11512100D2D2C8 /* Datatype.hpp in Headers */,
BEF795E022DDDE430054B192 /* BinaryOrAscii.hpp in Headers */,
BE53FC271E0D81A000C5D6F5 /* Traits.hxx in Headers */,
BE90E1C21A2492AA00CCAFDE /* SeldonFunctions.hxx in Headers */,
BE90E1A81A24929A00CCAFDE /* Parmetis.hpp in Headers */,
BEDE16BA204FFD7900DEFE08 /* Lua.hpp in Headers */,
BE90E1681A24926E00CCAFDE /* PointerComparison.hpp in Headers */,
BE90E1841A24929A00CCAFDE /* InputData.hxx in Headers */,
BE90E1C11A2492AA00CCAFDE /* SeldonFunctions.hpp in Headers */,
BE2CD3701CCFA8790040CA19 /* MatrixInfo.hxx in Headers */,
BEDE16A6204F365600DEFE08 /* LuaOptionFile.hpp in Headers */,
BE3FE9CB22C3D0D70093E95A /* LuaUtilityFunctions.hpp in Headers */,
......@@ -11390,7 +11377,6 @@
BE44C05B1AA463DF0030FA26 /* Pragma.hpp in Headers */,
0A2CBE981D05B87A007262F2 /* Model.hpp in Headers */,
BEF9B616231EA652009A680D /* GetRankDirectory.hpp in Headers */,
BE4ED31D1A2CBAC400DE374E /* MatrixOperations.hpp in Headers */,
BECEF92D22DF5D5E00D0DDE7 /* Now.hpp in Headers */,
BE90E1B11A24929A00CCAFDE /* Vector.hxx in Headers */,
BE353BC822E87E4F00A06A8F /* Pointer.hxx in Headers */,
......@@ -11429,6 +11415,7 @@
BE76F26A1D7D609E0061B50E /* GlobalVectorTemporary.hxx in Headers */,
BE90E1CE1A2492AA00CCAFDE /* PetscSnes.hpp in Headers */,
BE3D12C31D9B1FFB00F900F5 /* SnesConvergenceReason.hpp in Headers */,
BEE45C192358E2C300E0AB7C /* Functions.hpp in Headers */,
BE41A8D21A24AA83004E4312 /* Petsc.hpp in Headers */,
BE110EA21E11514200D2D2C8 /* CheckUpdateGhostManager.hxx in Headers */,
BE3FE9D622C500740093E95A /* HasMember.hpp in Headers */,
......@@ -12770,12 +12757,12 @@
BE90E1631A24926E00CCAFDE /* Factory.cpp in Sources */,
BE90E19E1A24929A00CCAFDE /* Op.cpp in Sources */,
BE2195191DF813290014FE44 /* Libmesh.cpp in Sources */,
BE4ED31C1A2CBAC400DE374E /* MatrixOperations.cpp in Sources */,
BE90E1BD1A24929A00CCAFDE /* Viewer.cpp in Sources */,
BEDE16A7204F365600DEFE08 /* LuaOptionFile.cpp in Sources */,
BE90E1821A24929A00CCAFDE /* InputData.cpp in Sources */,
BE3D12BF1D9B1FFB00F900F5 /* KspConvergenceReason.cpp in Sources */,
BE964C39206E6F4C00B9ED1E /* ExpectedResults_P2P1.cpp in Sources */,
BEE45C1A2358E2C300E0AB7C /* Functions.cpp in Sources */,
BEDEB9221C3C073100B1C71B /* Gmres.cpp in Sources */,
BE41A8C91A24AA46004E4312 /* Mpi.cpp in Sources */,
BE110EA01E11514200D2D2C8 /* CheckUpdateGhostManager.cpp in Sources */,
......@@ -12783,7 +12770,6 @@
BE2CD36E1CCFA8790040CA19 /* MatrixInfo.cpp in Sources */,
BE41A8CD1A24AA46004E4312 /* Mpi.cpp in Sources */,
BE90E17A1A24926E00CCAFDE /* Singleton.cpp in Sources */,
BE90E1C01A2492AA00CCAFDE /* SeldonFunctions.cpp in Sources */,
BE90E1A01A24929A00CCAFDE /* Comm.cpp in Sources */,
BE3FE9C922C3D0D70093E95A /* LuaUtilityFunctions.cpp in Sources */,
BE6E4EE11B2ABE8B0049BB2D /* AccessGhostContent.cpp in Sources */,
Sources/FiniteElement/FiniteElementSpace/FEltSpace.cpp
View file @ 71d7cb71
......@@ -12,7 +12,7 @@
*/
#include "ThirdParty/Wrappers/Seldon/SeldonFunctions.hpp"
#include "ThirdParty/Wrappers/Xtensor/Functions.hpp"
#include "Core/LinearAlgebra/GlobalVector.hpp"
......
Sources/FiniteElement/RefFiniteElement/Advanced/RefFEltInLocalOperator.cpp
View file @ 71d7cb71
......@@ -12,8 +12,8 @@
*/
#include "ThirdParty/Wrappers/Seldon/SeldonFunctions.hpp"
#include "ThirdParty/Wrappers/Seldon/MatrixOperations.hpp"
#include "ThirdParty/Wrappers/Xtensor/Functions.hpp"
#include "FiniteElement/RefFiniteElement/Advanced/RefFEltInLocalOperator.hpp"
......@@ -86,7 +86,7 @@ namespace MoReFEM
const auto ref_felt_space_dim = static_cast<std::size_t>(ref_felt.GetFEltSpaceDimension());
#ifndef NDEBUG
// \todo #1292 Wrappers::Seldon::AssertBlockRowValidity(full_matrix, row_range);
// \todo #1292 Wrappers::Xtensor::AssertBlockRowValidity(full_matrix, row_range);
#endif // NDEBUG
assert(ref_felt.Nnode() == row_range.size());
......@@ -116,7 +116,7 @@ namespace MoReFEM
const auto& row_range = ref_felt.GetLocalNodeIndexList();
#ifndef NDEBUG
// \todo #1292 Wrappers::Seldon::AssertBlockValidity(full_vector, row_range);
// \todo #1292 Wrappers::Xtensor::AssertBlockValidity(full_vector, row_range);
#endif // NDEBUG
const auto Nrow = row_range.size();
......
Sources/Geometry/GeometricElt/Advanced/FreeFunctions.cpp
View file @ 71d7cb71
......@@ -12,7 +12,7 @@
*/
#include "ThirdParty/Wrappers/Seldon/MatrixOperations.hpp"
#include "Utilities/Numeric/Numeric.hpp"
......@@ -128,7 +128,7 @@ namespace MoReFEM
//
// decltype(auto) jacobian = compute_jacobian_helper.Compute(geometric_elt, current_guess);
//
// LocalMatrix inv_jacobian = Wrappers::Seldon::ComputeInverseSquareMatrix(jacobian, det);
// LocalMatrix inv_jacobian = Wrappers::Xtensor::ComputeInverseSquareMatrix(jacobian, det);
//
// error = 0.;
//
......
Sources/OperatorInstances/VariationalOperator/BilinearForm/Local/Bidomain.cpp
View file @ 71d7cb71
......@@ -14,7 +14,7 @@
#include "Utilities/Numeric/Numeric.hpp"
#include "ThirdParty/Wrappers/Seldon/SeldonFunctions.hpp"
#include "ThirdParty/Wrappers/Xtensor/Functions.hpp"
#include "OperatorInstances/VariationalOperator/BilinearForm/Local/Bidomain.hpp"
......
Sources/OperatorInstances/VariationalOperator/BilinearForm/Local/GradOnGradientBasedElasticityTensor.cpp
View file @ 71d7cb71
......@@ -12,7 +12,7 @@
*/
#include "ThirdParty/Wrappers/Seldon/SeldonFunctions.hpp"
#include "ThirdParty/Wrappers/Xtensor/Functions.hpp"
#include "Parameters/InitParameterFromInputData/InitParameterFromInputData.hpp"
#include "ParameterInstances/GradientBasedElasticityTensor/GradientBasedElasticityTensor.hpp"
......
Sources/OperatorInstances/VariationalOperator/BilinearForm/Local/GradPhiGradPhi.cpp
View file @ 71d7cb71
......@@ -12,7 +12,7 @@
*/
#include "ThirdParty/Wrappers/Seldon/SeldonFunctions.hpp"
#include "ThirdParty/Wrappers/Xtensor/Functions.hpp"
#include "OperatorInstances/VariationalOperator/BilinearForm/Local/GradPhiGradPhi.hpp"
......
Sources/OperatorInstances/VariationalOperator/BilinearForm/Local/GradPhiTauOrthoTauGradPhi.cpp
View file @ 71d7cb71
......@@ -13,8 +13,8 @@
#include "Utilities/Numeric/Numeric.hpp"
#include "ThirdParty/Wrappers/Seldon/SeldonFunctions.hpp"
#include "ThirdParty/Wrappers/Seldon/MatrixOperations.hpp"
#include "ThirdParty/Wrappers/Xtensor/Functions.hpp"
#include "OperatorInstances/VariationalOperator/BilinearForm/Local/GradPhiTauOrthoTauGradPhi.hpp"
......@@ -329,7 +329,7 @@ namespace MoReFEM
double determinant = 0;
Wrappers::Seldon::ComputeInverseSquareMatrix(covariant_metric_tensor, contravariant_metric_tensor, determinant);
Wrappers::Xtensor::ComputeInverseSquareMatrix(covariant_metric_tensor, contravariant_metric_tensor, determinant);
int int_Ncomponent = static_cast<int>(Ncomponent);
......
Sources/OperatorInstances/VariationalOperator/BilinearForm/Local/GradPhiTauTauGradPhi.cpp
View file @ 71d7cb71
......@@ -14,7 +14,7 @@
#include "Utilities/Numeric/Numeric.hpp"
#include "ThirdParty/Wrappers/Seldon/SeldonFunctions.hpp"
#include "ThirdParty/Wrappers/Xtensor/Functions.hpp"
#include "OperatorInstances/VariationalOperator/BilinearForm/Local/GradPhiTauTauGradPhi.hpp"
......
Sources/OperatorInstances/VariationalOperator/BilinearForm/Local/Mass.cpp
View file @ 71d7cb71
......@@ -12,7 +12,7 @@
*/
#include "ThirdParty/Wrappers/Seldon/SeldonFunctions.hpp"
#include "ThirdParty/Wrappers/Xtensor/Functions.hpp"
#include "OperatorInstances/VariationalOperator/BilinearForm/Local/Mass.hpp"
......
Sources/OperatorInstances/VariationalOperator/BilinearForm/Local/ScalarDivVectorial.cpp
View file @ 71d7cb71
......@@ -12,7 +12,7 @@
*/
#include "ThirdParty/Wrappers/Seldon/SeldonFunctions.hpp"
#include "ThirdParty/Wrappers/Xtensor/Functions.hpp"
#include "OperatorInstances/VariationalOperator/BilinearForm/Local/ScalarDivVectorial.hpp"
......
Sources/OperatorInstances/VariationalOperator/BilinearForm/Local/Stokes.cpp
View file @ 71d7cb71
......@@ -12,7 +12,7 @@
*/
#include "ThirdParty/Wrappers/Seldon/SeldonFunctions.hpp"
#include "ThirdParty/Wrappers/Xtensor/Functions.hpp"
#include "OperatorInstances/VariationalOperator/BilinearForm/Local/Stokes.hpp"
......
Sources/OperatorInstances/VariationalOperator/BilinearForm/Local/SurfacicBidomain.cpp
View file @ 71d7cb71
......@@ -14,8 +14,8 @@
#include "ThirdParty/Wrappers/Seldon/SeldonFunctions.hpp"
#include "ThirdParty/Wrappers/Seldon/MatrixOperations.hpp"
#include "ThirdParty/Wrappers/Xtensor/Functions.hpp"
#include "Utilities/Numeric/Numeric.hpp"
......@@ -454,7 +454,7 @@ namespace MoReFEM
double determinant = 0;
Wrappers::Seldon::ComputeInverseSquareMatrix(covariant_metric_tensor, contravariant_metric_tensor, determinant);
Wrappers::Xtensor::ComputeInverseSquareMatrix(covariant_metric_tensor, contravariant_metric_tensor, determinant);
int int_Ncomponent = static_cast<int>(Ncomponent);
......
Sources/OperatorInstances/VariationalOperator/BilinearForm/Local/VariableMass.hpp
View file @ 71d7cb71
......@@ -18,7 +18,7 @@
# include <memory>
# include <vector>
# include "ThirdParty/Wrappers/Seldon/SeldonFunctions.hpp"
# include "ThirdParty/Wrappers/Xtensor/Functions.hpp"
# include "Parameters/ParameterAtDof.hpp"
......
Sources/OperatorInstances/VariationalOperator/NonlinearForm/Local/NonlinearMembrane.cpp
View file @ 71d7cb71
......@@ -14,8 +14,8 @@
#include "Utilities/Numeric/Numeric.hpp"
#include "ThirdParty/Wrappers/Seldon/SeldonFunctions.hpp"
#include "ThirdParty/Wrappers/Seldon/MatrixOperations.hpp"
#include "ThirdParty/Wrappers/Xtensor/Functions.hpp"
#include "OperatorInstances/VariationalOperator/NonlinearForm/Local/NonlinearMembrane.hpp"
......@@ -311,7 +311,7 @@ namespace MoReFEM::Advanced::LocalVariationalOperatorNS
xt::noalias(covariant_metric_tensor) = xt::linalg::dot(transposed_covariant_basis, covariant_basis);
Wrappers::Seldon::ComputeInverseSquareMatrix(covariant_metric_tensor,
Wrappers::Xtensor::ComputeInverseSquareMatrix(covariant_metric_tensor,
contravariant_metric_tensor,
determinant);
......
Sources/OperatorInstances/VariationalOperator/NonlinearForm/Local/SecondPiolaKirchhoffStressTensor/HyperelasticityPolicy/Hyperelasticity.hpp
View file @ 71d7cb71
......@@ -20,8 +20,7 @@
# include "Utilities/Containers/EnumClass.hpp"
# include "ThirdParty/Wrappers/Seldon/SeldonFunctions.hpp"
# include "ThirdParty/Wrappers/Seldon/MatrixOperations.hpp"
# include "ThirdParty/Wrappers/Xtensor/Functions.hpp"
# include "Parameters/ParameterAtQuadraturePoint.hpp"
# include "ParameterInstances/Compound/Solid/Solid.hpp"
......
Sources/OperatorInstances/VariationalOperator/NonlinearForm/Local/SecondPiolaKirchhoffStressTensor/HyperelasticityPolicy/Hyperelasticity.hxx
View file @ 71d7cb71
......@@ -109,7 +109,7 @@ namespace MoReFEM
const auto& d2I3dCdC = invariant_holder.GetSecondDerivativeWrtCauchyGreen(invariant_holder_type::invariants_second_derivative_index::d2I3dCdC);
{
assert(Wrappers::Seldon::IsZeroMatrix(d2W));
assert(Wrappers::Xtensor::IsZeroMatrix(d2W));
// d2I1dCdC = d2I4dCdC = 0
xt::noalias(d2W) += dWdI2 * d2I2dCdC;
xt::noalias(d2W) += dWdI3 * d2I3dCdC;
......@@ -130,7 +130,7 @@ namespace MoReFEM
const double d2WdI2dI3 =
law.SecondDerivativeWSecondAndThirdInvariant(invariant_holder, quad_pt, geom_elt);
using namespace Wrappers::Seldon;
using namespace Wrappers::Xtensor;
auto& outer_prod = GetNonCstWorkMatrixOuterProduct();
......@@ -239,7 +239,7 @@ namespace MoReFEM
{
assert(Wrappers::Seldon::IsZeroVector(dW));
assert(Wrappers::Xtensor::IsZeroVector(dW));
xt::noalias(dW) += dWdI1 * dI1dC;
xt::noalias(dW) += dWdI2 * dI2dC;
xt::noalias(dW) += dWdI3 * dI3dC;
......
Sources/OperatorInstances/VariationalOperator/NonlinearForm/Local/SecondPiolaKirchhoffStressTensor/Internal/Helper.hpp
View file @ 71d7cb71
......@@ -15,7 +15,7 @@
#ifndef MOREFEM_x_OPERATOR_INSTANCES_x_VARIATIONAL_OPERATOR_x_NONLINEAR_FORM_x_LOCAL_x_SECOND_PIOLA_KIRCHHOFF_STRESS_TENSOR_x_INTERNAL_x_HELPER_HPP_
# define MOREFEM_x_OPERATOR_INSTANCES_x_VARIATIONAL_OPERATOR_x_NONLINEAR_FORM_x_LOCAL_x_SECOND_PIOLA_KIRCHHOFF_STRESS_TENSOR_x_INTERNAL_x_HELPER_HPP_
# include "ThirdParty/Wrappers/Seldon/SeldonFunctions.hpp"
# include "ThirdParty/Wrappers/Xtensor/Functions.hpp"
# include "Core/Enum.hpp"
......
Sources/OperatorInstances/VariationalOperator/NonlinearForm/Local/SecondPiolaKirchhoffStressTensor/InternalVariablePolicy/AnalyticalPrestress.hpp
View file @ 71d7cb71
......@@ -22,7 +22,7 @@
# include "Utilities/Numeric/Numeric.hpp"
# include "Utilities/LinearAlgebra/Storage/Local/LocalVectorStorage.hpp"
#include "ThirdParty/Wrappers/Seldon/SeldonFunctions.hpp"
#include "ThirdParty/Wrappers/Xtensor/Functions.hpp"
# include "Core/TimeManager/TimeManager.hpp"
......
Sources/OperatorInstances/VariationalOperator/NonlinearForm/Local/SecondPiolaKirchhoffStressTensor/ViscoelasticityPolicy/Viscoelasticity.hpp
View file @ 71d7cb71
......@@ -22,8 +22,7 @@
# include "Utilities/Numeric/Numeric.hpp"
# include "Utilities/LinearAlgebra/Storage/Local/LocalVectorStorage.hpp"
# include "ThirdParty/Wrappers/Seldon/MatrixOperations.hpp"
# include "ThirdParty/Wrappers/Seldon/SeldonFunctions.hpp"
# include "ThirdParty/Wrappers/Xtensor/Functions.hpp"
# include "Core/TimeManager/TimeManager.hpp"
......
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