Commit 9b71273c authored by VIGNET Pierre's avatar VIGNET Pierre
Browse files

Clean file

parent d0ccac62
......@@ -45,8 +45,6 @@ import cadbiom.commons as cm
LOGGER = cm.logger()
LOG_DIR = "./logs/"
BIO_MOLDELS_DIR = "./bio_models/"
GRAPHS_DIR = "./graphs/"
"""
......@@ -851,15 +849,13 @@ def graph_isomorph_test(model_file_1, model_file_2, make_graphs=False):
if __name__ == "__main__":
# cond = "((((CXCL10_CXCR3_intToMb and not(CCL11_CXCR3_intToMb)))or((CXCL10_CXCR3_intToMb and not(CXCL13_CXCR3_intToMb))))or(CXCL9_11_CXCR3_active_intToMb))or(CXCL4_CXCR3_intToMb)"
# cond = "((((A and not(B)))or((A and not(C))))or(D))or(E)"
# cond = "(A and not(B))"
# cond = "(A and not(B))"
# cond = "(((((A)or(B))or(C))or(B))or(D))or(E)"
# cond = "((((not(ATF2_JUND_macroH2A_nucl))or(Fra1_JUND_active_nucl))or(Fra1_JUN_active_nucl))or(TCF4_betacatenin_active_nucl))or(JUN_FOS_active_nucl)"
# cond = "((A and B and C)) and (not((D and E and F and G)))"
# ret = parse_condition(cond)
# print(ret)
LOG_DIR = "./logs/"
BIO_MOLDELS_DIR = "./bio_models/"
graph_isomorph_test(BIO_MOLDELS_DIR + "mini_test_publi.bcx",
BIO_MOLDELS_DIR + "mini_test_publi_mod.bcx")
exit()
process_solutions(load_solutions(LOG_DIR + "../run/Whole NCI-PID database translated into CADBIOM formalism(and)_SRP9_cam_complete.txt"),
get_transitions(BIO_MOLDELS_DIR + "Whole NCI-PID database translated into CADBIOM formalism(and).bcx"))
......
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