Commit 647834cd authored by MARIJON Pierre's avatar MARIJON Pierre

Correct error in script for html report name

parent 4c83bd0b
......@@ -14,6 +14,7 @@ rule build_AGG:
shell:
"knot.path_search {input.search} {output} {input.ovl_graph} {input.read2asm} {input.asm_graph} {input.tig2tig} --search-mode " + config["search_mode"] + self_lookup
rule filter_contigs:
input:
"{prefix}contigs.fasta"
......@@ -24,6 +25,7 @@ rule filter_contigs:
shell:
"knot.filter_tig {input} {output} -t " + str(config['min_contig_length'])
rule map_contigs2contigs:
input:
"{prefix}contigs_filtred.fasta"
......
......@@ -46,7 +46,7 @@ setup(
'knot.extremity_search = knot.extremity_search.__main__:main',
'knot.analysis.classifications = knot.analysis.classifications:main',
'knot.analysis.hamilton_path = knot.analysis.hamilton_path:main',
'knot.analysis = knot.analysis.generation_report:main'
'knot.analysis = knot.analysis.generate_report:main'
]
}
)
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