From f54726467ec99efbaf01cc8ed83af80bd9c7110c Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?J=C3=A9r=C3=B4me=20Euzenat?= <Jerome.Euzenat@inria.fr>
Date: Mon, 17 Jul 2006 09:59:46 +0000
Subject: [PATCH] - full revision of the style of the web pages - added
reference to the tutorial
---
html/align.html | 140 +++++++++++++++-----------------
html/alignwn.html | 4 +-
html/data.html | 4 +-
html/eval.html | 4 +-
html/format.html | 16 ++--
html/index.html | 23 ++++--
html/owlapi.html | 4 +-
html/relnotes.html | 4 +-
html/style.css | 98 +++++++++++++---------
html/tutorial/base.css | 80 ------------------
html/tutorial/index.html | 48 ++++++-----
html/tutorial/results/jwnl.html | 0
html/tutorial/style.css | 67 ---------------
13 files changed, 193 insertions(+), 299 deletions(-)
delete mode 100644 html/tutorial/base.css
create mode 100644 html/tutorial/results/jwnl.html
delete mode 100644 html/tutorial/style.css
diff --git a/html/align.html b/html/align.html
index 80b83f92..ca1e6337 100644
--- a/html/align.html
+++ b/html/align.html
@@ -1,32 +1,36 @@
<html>
<head>
<title>The alignment API in Java</title>
-<style type="text/css">@import url(style.css);</style>
+<!--style type="text/css">@import url(style.css);</style-->
+<link rel="stylesheet" type="text/css" href="base.css" />
+<link rel="stylesheet" type="text/css" href="style.css" />
</head>
<body bgcolor="#ffffff">
<h1 class="titre">The alignment API in Java</h1>
-<p>We develop an alignment toolkit for OWL by:
+<p>We have developed an alignment toolkit for OWL by:
<ul compact="1">
<li>Extending the OWL-API towards <a href="format.html">alignment</a>;</li>
-<li>Providing an implementation of the API;</li>
+<li>Providing an implementation of the Alignment API;</li>
<li>Implementing further alignment methods;</li>
</ul></p>
-<p>An extensive presentation of the alignment API can be found <a href="align.pdf">here</a>.</p>
+<p>An extensive presentation of the alignment API can be
+ found <a href="align.pdf">here</a>. We also have
+ a <a href="tutorial">tutorial</a> on using it.</p>
-<h1>Getting ontoalign</h1>
+<h2>Getting the Alignment API</h2>
-<h2>Fetching the ZIP'ed version</h2>
+<h3>Fetching the ZIP'ed version</h3>
-<p>The simplest way to use ontoalign is to get the last release
+<p>The simplest way to use alignapi is to get the last release
zipfile from the site <a href="http://gforge.inria.fr/frs/?group_id=117">http://gforge.inria.fr/frs/?group_id=117</a>. It contains all the sources, compiled
library, OWL API library.</p>
-<h2>Anonymous Subversion</h2>
+<h3>Anonymous Subversion</h3>
-<p>The very last version of ontoalign can be fetched from the subversion
+<p>The very last version of alignapi can be fetched from the subversion
source tree that can be found at:
<a href="http://gforge.inria.fr/scm/?group_id=117">http://gforge.inria.fr/scm/?group_id=117</a>
</p>
@@ -37,20 +41,20 @@ library, OWL API library.</p>
smoothly upgrade it.</dd>
<dt>Checking out (anonymously) the repository</dt>
<dd>Can be achieved by just doing the following:
-<pre>
<!-- $ cvs -d :pserver:cvs@cvs-sop.inria.fr:/CVS/exmosoft login
<ENTER return when asked for the password>
$ cvs -d :pserver:cvs@cvs-sop.inria.fr:/CVS/exmosoft checkout
-ontoalign-->
+alignapi-->
+<div class="fragment"><pre>
$ svn checkout svn://scm.gforge.inria.fr/svn/alignapi/trunk/
-</pre>
+</pre></div>
... and you are done.</dd>
</dl>
Note that you may have to fetch separately the <a href="owlapi.html">OWL-API</a>.</p>
-<h2>Subversion account</h2>
+<h3>Subversion account</h3>
-<p>If you have improved ontoalign and want this to be included in the
+<p>If you have improved alignapi and want this to be included in the
source base or if you want to seriously work on improving the
software, please contact
Jerome . Euzenat (À) inrialpes . fr.</p>
@@ -61,31 +65,49 @@ Note that you may have to fetch separately the <a href="owlapi.html">OWL-API</a>
<p>Once provided with a password you will be able to check out from and
commit in our repository through:
-<pre>
+<div class="fragment"><pre>
<!--
$ export CVS_RSH=`which ssh`
$ cvs -d :ext:<loginname>@cvs-sop.inria.fr:/CVS/exmosoft --
- --checkout ontoalign
+ --checkout alignapi
-->
$ svn checkout svn+ssh://username@scm.gforge.inria.fr/svn/alignapi/trunk
-</pre>
+</pre></div>
(If you are not familliar with subversion, it is worth looking at the
documentation. If you are familiar with CVS, the move is straightforward.)
</p>
-<h2>Release notes</h2>
+<h3>Running</h3>
+
+<p>Running the program is achieved through:
+<div class="fragment"><pre>
+$ java -jar lib/procalign.jar
+usage: Procalign [options] URI1 URI2
+options are:
+ --impl=className -i classname Use the given alignment implementation.
+ --renderer=className -r className Specifies the alignment renderer
+ --output=filename -o filename Output the alignment in filename
+ --alignment=filename -a filename Start from an XML alignment file
+ --threshold=double -t double Filters the similarities under threshold
+ --debug[=n] -d [n] Report debug info at level n
+ --help -h Print this message
+</pre></div>
+More details are available below.
+</p>
+
+<h3>Release notes</h3>
<p>They are provided <a href="relnotes.html">here</a>.</p>
-<h2>Documentation</h2>
+<h3>Documentation</h3>
<p>The documentation can be found on <a href="http://gforge.inria.fr/docman/?group_id=117">http://gforge.inria.fr/docman/?group_id=117</a>.</p>
-<h1>Installation</h1>
+<h2>Installation</h2>
<p>"Installing" is really straightforward.</p>
-<h2>Files</h2>
+<h3>Files</h3>
-<p>Whatever your mode of getting ontolign you will get an ontoalign
+<p>Whatever your mode of getting ontolign you will get an alignapi
directory containing the following subdirectories:
<ul compact="1">
<li>src: source classes;</li>
@@ -94,6 +116,7 @@ documentation. If you are familiar with CVS, the move is straightforward.)
<li>dtd: the align.dtd and align.owl alignment specification;</li>
<li>lib: jar-files (in the zip-file the owl-api libraries are included);</li>
<li>html: a few html presentation files</li>
+ <li>html/tutorial: a tutorial on using the API</li>
<li>build.xml: ant file to compile and generate jar-files.</li>
<li>distrib: contains a few files for building the distribution</li>
<li>classes: the compiled classes (in the zip file, the classes are
@@ -104,7 +127,7 @@ documentation. If you are familiar with CVS, the move is straightforward.)
</ul>
</p>
-<h2>Requirements</h2>
+<h3>Requirements</h3>
<p><b>For using</b> you will need <a href="http://java.sun.com">Java
runtime environment</a> (tested in 1.4.1) and the <a href="owlapi.html">OWL-API binary distribution</a> (this is
@@ -122,7 +145,7 @@ Note that OWL-API needs log4j and getopt packages, but these are
included in the SVN repository). It is also very usefull to
have <a ref="http://ant.apache.org">Ant</a>.</p>
-<h2>Required libraries (jar)</h2>
+<h3>Required libraries (jar)</h3>
<p>Using the api (align.jar) requires:
<ul compact="1">
@@ -142,76 +165,43 @@ addition:
<li>The Java WordNet Library (jwnl.jar).</li>
</ul></p>
-<h2>Assembling</h2>
+<h3>Assembling</h3>
<p>A good way of setting your environment (from the SVN archive) for
developing is to unzip the OWL-API binary distribution and put the
- files in the ontoalign directories:
-<pre>
+ files in the alignapi directories:
+<div class="fragment"><pre>
$ unzip owlapi-bin-03-10-15.zip
$ mv owl/lib/* lib
$ ant jar
$ mv owl/javadoc/* javadoc
$ ant javadoc
$ rm -rf owl
-</pre>
+</pre></div>
</p>
-<h1>Compilation and use</h1>
+<h2>Compilation and use</h2>
<p>Generating the lib/procalign.jar file (and the other libraries) can
be done by launching:
-<pre>
+<div class="fragment"><pre>
$ ant jar
-</pre></p>
+</pre></div></p>
+
+<h2>Using the API</h2>
-<h1>Using the API</h1>
+<p>A <a href="tutorial">tutorial</a> presents how to use the Alignment
+ API</p>
<p>An extensive presentation of the alignment API can be found
in the documentation section. It documents use and extension of the API.</p>
-<p>For demonstrating the use of the API, we implement it and use it
- through a particular processor
- (<tt>fr.inrialpes.exmo.align.util.Procalign</tt>) which:
-<ul compact="1">
-<li>Reads two OWL/RDF ontologies;</li>
-<li>Creates an alignment object;</li>
-<li>Computes the alignment between these ontologies;</li>
-<li>Displays the result.</li>
-</ul>
-Running the program is achieved through:
-<pre>
-$ java -jar lib/procalign.jar
-usage: Procalign [options] URI1 URI2
-options are:
- --impl=className -i classname Use the given alignment implementation.
- --renderer=className -r className Specifies the alignment renderer
- --output=filename -o filename Output the alignment in filename
- --alignment=filename -a filename Start from an XML alignment file
- --threshold=double -t double Filters the similarities under threshold
- --debug[=n] -d [n] Report debug info at level n
- --help -h Print this message
-</pre>
-or ($CWD is the current directory)
-<pre>
-$ java -jar lib/procalign.jar file://localhost$CWD/rdf/onto1.owl file://localhost$CWD/rdf/onto2.owl
-</pre>
-Additionaly a number of options are available:
-<ul compact="1">
-<li>displaying debug information (-d);</li>
-<li>controling the way of rendering the output (-r);</li>
-<li>deciding the implementation of the alignment method (-i);</li>
-<li>providing an input alignent (-a) [implemented but not used by most
- methods].</li>
-</ul>
-</p>
-
-<h1>License</h1>
+<h2>License</h2>
<p>The alignment API and its implementation is distributed under the
GNU <a href="../distrib/LICENSE.TXT">Lesser General Public License</a>.</p>
-<h1>The alignment API</h1>
+<h2>The alignment API</h2>
<p>The OWL-API is extended with the
(<tt>org.semanticweb.owl.align</tt>) package. Which describes the
Alignment API. This API is, in turns, an "implementation" of the <a
@@ -233,7 +223,7 @@ Additionaly a number of options are available:
contains a method for calling a particular alignment method (it is
a sub-interface of <tt>Alignment</tt>) and an <tt>AlignmentException</tt>.</p>
-<h1>Implementing and extending the API</h1>
+<h2>Implementing and extending the API</h2>
<p>A (default) impplementation of this API can be found in
the <tt>fr.inrialpes.exmo.align.impl</tt> package.</p>
<p>Adding new alignments methods amounts to create a
@@ -253,11 +243,11 @@ Additionaly a number of options are available:
the <tt>EditDistNameAlignment</tt> class which uses an edit
distance on class names. It thus have to build a matrix of distance
and to choose the alignment from the distance. It can be called by:
-<pre>
+<div class="fragment"><pre>
$ java -jar lib/procalign.jar file://localhost$CWD/rdf/onto1.owl file://localhost$CWD/rdf/onto2.owl -i fr.inrialpes.exmo.align.impl.method.EditDistNameAlignment
-</Pre>
+</pre></div>
which returns:
-<pre>
+<div class="code"><pre>
<?xml version='1.0' encoding='utf-8' standalone='no'?>
<!DOCTYPE rdf:RDF SYSTEM "align.dtd">
@@ -284,7 +274,7 @@ which returns:
</map>
</Alignment>
</rdf:RDF>
-</pre>
+</pre></div>
</p>
<address>
diff --git a/html/alignwn.html b/html/alignwn.html
index 83449ba0..8d9b76e6 100644
--- a/html/alignwn.html
+++ b/html/alignwn.html
@@ -1,7 +1,9 @@
<html>
<head>
<title>Using the Alignment API with Wordnet</title>
-<style type="text/css">@import url(style.css);</style>
+<!--style type="text/css">@import url(style.css);</style-->
+<link rel="stylesheet" type="text/css" href="base.css" />
+<link rel="stylesheet" type="text/css" href="style.css" />
</head>
<body>
diff --git a/html/data.html b/html/data.html
index 398cef61..50fd1ecf 100644
--- a/html/data.html
+++ b/html/data.html
@@ -1,7 +1,9 @@
<html>
<head>
<title>Ontologies to compare</title>
-<style type="text/css">@import url(style.css);</style>
+<!--style type="text/css">@import url(style.css);</style-->
+<link rel="stylesheet" type="text/css" href="base.css" />
+<link rel="stylesheet" type="text/css" href="style.css" />
</head>
<body bgcolor="#ffffff">
diff --git a/html/eval.html b/html/eval.html
index d3dc4493..d5088a57 100644
--- a/html/eval.html
+++ b/html/eval.html
@@ -1,7 +1,9 @@
<html>
<head>
<title>Evaluating alignments</title>
-<style type="text/css">@import url(style.css);</style>
+<!--style type="text/css">@import url(style.css);</style-->
+<link rel="stylesheet" type="text/css" href="base.css" />
+<link rel="stylesheet" type="text/css" href="style.css" />
</head>
<body bgcolor="#ffffff">
diff --git a/html/format.html b/html/format.html
index 00010805..6bf0eb46 100644
--- a/html/format.html
+++ b/html/format.html
@@ -1,7 +1,9 @@
<html>
<head>
<title>A format for ontology alignment</title>
-<style type="text/css">@import url(style.css);</style>
+<!--style type="text/css">@import url(style.css);</style-->
+<link rel="stylesheet" type="text/css" href="base.css" />
+<link rel="stylesheet" type="text/css" href="style.css" />
</head>
<body bgcollor="#ffffff">
@@ -18,7 +20,7 @@
some implementations.</p>
-<h1>Specifications</h1>
+<h2>Specifications</h2>
<p>There are two specifications of the format:
<dl compact="1">
@@ -33,9 +35,9 @@
<p>The namespace used by these formats is <tt>http://knowledgeweb.semanticweb.org/heterogeneity/alignment</tt>.</p>
-<h1>Format descriptions</h1>
+<h2>Format descriptions</h2>
-<h2><tt>Alignment</tt> class</h2>
+<h3><tt>Alignment</tt> class</h3>
<p>The <tt>Alignment</tt> class describes a partlicular alignment. Its
properties are the following:
@@ -51,7 +53,7 @@
entities of the ontologies.</dd>
</dl></p>
-<h2><tt>Cell</tt> class</h2>
+<h3><tt>Cell</tt> class</h3>
<dl compact="1">
<dt>entity1</dt><dd>(value: URI) the URI of some entity of the first ontology;</dd>
<dt>entity2</dt><dd>(value: URI) the URI of some entity of the second ontology;</dd>
@@ -64,13 +66,11 @@
between the first and second entity.</dd>
</dl></p>
-<h2><tt>Relation</tt> class</h2>
+<h3><tt>Relation</tt> class</h3>
<p>This class does not currently exists in the format (it exists in
its implementation). Currently, the relation is expressed as a string.</p>
-<h1>Implementations</h1>
-
<h2>JAVA implementation</h2>
<p>There is a <a href="align.html">JAVA API</a>, extending the <a href="owlapi.html">OWL API</a> implementing this
format.</p>
diff --git a/html/index.html b/html/index.html
index da0eb3f3..a78cc741 100644
--- a/html/index.html
+++ b/html/index.html
@@ -1,7 +1,9 @@
<html>
<head>
<title>Alignment API</title>
-<style type="text/css">@import url(style.css);</style>
+<!--style type="text/css">@import url(style.css);</style-->
+<link rel="stylesheet" type="text/css" href="base.css" />
+<link rel="stylesheet" type="text/css" href="style.css" />
</head>
<body>
@@ -21,19 +23,24 @@
</dt>
<dd>The alignment format in RDF/XML.</dd>
<dt><a href="align.html">Alignment API</a>
-<a href="http://gforge.inria.fr/frs/?group_id=117">[<font color="red">Download page</font>]</a></dt>
+[<a
+ href="http://gforge.inria.fr/frs/?group_id=117"><font
+ color="red">Download page</font></a> + <a href="relnotes.html"><font
+ color="red">Release notes</font></a>]</dt>
<dd>
-An alignment API in Java and implementation on top of the OWL API.</dd>
-<dt><a href="owlapi.html">OWL-API</a> <a href="http://sourceforge.net/projects/owlapi">[<font color="red">Download here</font>]</a></dt>
+An alignment API in Java and implementation on top of the OWL
+API.</dd>
+<dt><a href="tutorial">A tutorial</a></dt><dd>on how to use the Alignment API implementation</dd>
+<dt><a href="alignwn.html">Using the API with wordnet</a>
+[Included with the API zip file]</dt>
+<dd>Demonstrate how to use wordnet within the API</dd>
+<dt><a href="owlapi.html">OWL-API</a> [Included with the API zip file]</dt>
<dd>Starting quickly with OWL-API.</dd>
<!--dt><a href="data.html">Ontologies</a></dt>
<dd>Some data for aligning.</dd>
<dt><a href="eval.html">Evaluators</a></dt>
<dd>Evaluating alignments from the format.</dd-->
-<dt><a href="alignwn.html">Using the API with wordnet</a>
-[<font color="red">Included with the API zip file</font>]</a></dt>
-<dd>Demonstrate how to use wordnet within the API</dd>
-<a href="http://VisOn.gforge.inria.fr">[<font color="red">VisOn</font>]</a></dt>
+<dt><a href="http://VisOn.gforge.inria.fr">[<font color="red">VisOn</font>]</a></dt>
<dd>The VisOn ontology visualizer now works with any implementation of
the API. It provides the opportunity to load and display
ontologies, load, run, display and compare alignment algorithms.</dd>
diff --git a/html/owlapi.html b/html/owlapi.html
index 5251038d..0ca862a5 100644
--- a/html/owlapi.html
+++ b/html/owlapi.html
@@ -1,7 +1,9 @@
<html>
<head>
<title>Comments on OWL-API</title>
-<style type="text/css">@import url(style.css);</style>
+<!--style type="text/css">@import url(style.css);</style-->
+<link rel="stylesheet" type="text/css" href="base.css" />
+<link rel="stylesheet" type="text/css" href="style.css" />
</head>
<body bgcolor="#ffffff">
diff --git a/html/relnotes.html b/html/relnotes.html
index 031557f4..3b29dda1 100644
--- a/html/relnotes.html
+++ b/html/relnotes.html
@@ -1,7 +1,9 @@
<html>
<head>
<title>Alignment API: Release notes</title>
-<style type="text/css">@import url(style.css);</style>
+<!--style type="text/css">@import url(style.css);</style-->
+<link rel="stylesheet" type="text/css" href="base.css" />
+<link rel="stylesheet" type="text/css" href="style.css" />
</head>
<body bgcolor="#ffffff">
diff --git a/html/style.css b/html/style.css
index 490a054e..72d65e9d 100644
--- a/html/style.css
+++ b/html/style.css
@@ -1,11 +1,3 @@
-BODY {
- color: Black;
- background-color: #D3D3D3;
- font-family: Verdana, sans-serif;
- font-size: 12px;
- text-align: justify;
-}
-
A {
color: #0000CD;
text-decoration: none;
@@ -15,44 +7,76 @@ A:HOVER {
color: Navy;
text-decoration: none;
}
+div.owl {
+ background: #edd;
+ border:1pt solid;
+}
+div.fragment {
+ background: #dde;
+ border:1pt solid;
+ overflow-y: scroll;
+}
+div.logic {
+ background: #ded;
+ border:1pt solid;
+}
+
+.detail {
+ background: lightYellow;
+ border:1pt solid red;
+/* margin-top: 0.6em;
+ margin-bottom: 0.6em; */
+}
+
+.inference {
+ background: white;
+ font-weight: bold;
+ font-size: large;
+}
-.titreSection {
- font-size:18px;
- padding-left:10px;
- padding-bottom:10px;
- padding-top:5px;
+.explain {
+ display:none;
+ background: lightYellow;
+ border:1pt solid red;
}
-.titre1 {
- font-size:16px;
- font-weight:bold;
- padding-left:14px;
- padding-bottom:5px;
- padding-top:10px;
+.button {
}
-.titre {
- font-size:28px;
- padding-bottom:20px;
+/*
+.explain {
}
-.texte {
- font-size:12px;
- padding-left:20px;
- padding-right:20px;
- padding-bottom:5px;
- padding-top:5px;
+.button {
+ display:none;
}
+*/
-.code {
- font-family: Courier, sans-serif;
- font-size:12px;
- padding-left:20px;
- padding-right:20px;
- padding-bottom:5px;
- padding-top:5px;
+table {
+ border: solid 2pt;
}
-.puce {
- padding-bottom:5px;
+td {
+ border: solid 1pt;
+ padding: 1px;
}
+
+th {
+ border: solid 1pt;
+ padding: 10px;
+}
+
+.imgdiv {
+ text-align: center;
+}
+
+.facts {
+ margin: 10px;
+}
+
+body {
+ text-align: justify;
+ padding: 2em 1em 2em 1em;
+ }
+
+h2 { border-bottom: 1px solid #000088; }
diff --git a/html/tutorial/base.css b/html/tutorial/base.css
deleted file mode 100644
index 56a10ba4..00000000
--- a/html/tutorial/base.css
+++ /dev/null
@@ -1,80 +0,0 @@
-/*
- Copyright 1997-2003 W3C (MIT, ERCIM, Keio). All Rights Reserved.
- The following software licensing rules apply:
- http://www.w3.org/Consortium/Legal/copyright-software */
-
-/* $Id: base.css,v 1.24 2003/04/17 13:56:40 bbos Exp $ */
-
-body {
- padding: 2em 1em 2em 70px;
- margin: 0;
- font-family: sans-serif;
- color: black;
- background: white;
- background-position: top left;
- background-attachment: fixed;
- background-repeat: no-repeat;
-}
-:link { color: #00C; background: transparent }
-:visited { color: #609; background: transparent }
-a:active { color: #C00; background: transparent }
-
-a:link img, a:visited img { border-style: none } /* no border on img links */
-
-a img { color: white; } /* trick to hide the border in Netscape 4 */
-@media all { /* hide the next rule from Netscape 4 */
- a img { color: inherit; } /* undo the color change above */
-}
-
-th, td { /* ns 4 */
- font-family: sans-serif;
-}
-
-h1, h2, h3, h4, h5, h6 { text-align: left }
-/* background should be transparent, but WebTV has a bug */
-h1, h2, h3 { color: #005A9C; background: white }
-h1 { font: 170% sans-serif }
-h2 { font: 140% sans-serif }
-h3 { font: 120% sans-serif }
-h4 { font: bold 100% sans-serif }
-h5 { font: italic 100% sans-serif }
-h6 { font: small-caps 100% sans-serif }
-
-.hide { display: none }
-
-div.head { margin-bottom: 1em }
-div.head h1 { margin-top: 2em; clear: both }
-div.head table { margin-left: 2em; margin-top: 2em }
-
-p.copyright { font-size: small }
-p.copyright small { font-size: small }
-
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diff --git a/html/tutorial/index.html b/html/tutorial/index.html
index 468ae98b..d6b4b7b4 100644
--- a/html/tutorial/index.html
+++ b/html/tutorial/index.html
@@ -12,10 +12,8 @@ function hide(id) {
}
</script>
-<link rel="stylesheet" type="text/css"
- href="base.css" />
-<link rel="stylesheet" type="text/css"
- href="style.css" />
+<link rel="stylesheet" type="text/css" href="../base.css" />
+<link rel="stylesheet" type="text/css" href="../style.css" />
</head><body bgcolor="white">
<h1>A small tutorial on the Alignment API</h1>
@@ -35,7 +33,6 @@ http://alignapi.gforge.inria.fr/tutorial/
</dl>
<hr />
-
<p>Here is a small tutorial for the alignment API. Since the API has no
dedicated GUI, most of the tutorial is based on command-lines
invocations. Of course, it is not the natural way to use this API:
@@ -43,8 +40,8 @@ dedicated GUI, most of the tutorial is based on command-lines
are working towards implementing an alignment server that can help
programmes to use the API remotely. The complete tutorial is also
available as a self-contained <a href="script.sh">script.sh</a> or <a href="script.bat">script.bat</a>.</p>
-
<hr />
+
<h2>Preparation</h2>
<p>For running the alignment API, you must have a Java interpreter
@@ -79,9 +76,12 @@ options are:
-Dparam=value Set parameter
--help -h Print this message
</pre></div></p>
-This should output the command line usage of the Procalign
-class. We do not detail it here, this tutorial will present
+The above command outputs the command line usage of the Procalign class.
+We do not detail it here, this tutorial will present
it entirelly.</p>
+<p>If you want to modify the Alignment API and its implementation,
+ please refer to <a href="../align.html">this page</a>. In this
+ tutorial, we will simply learn how to use it.</p>
<p>You will then go to the tutorial directory by doing
<div class="fragment"><pre>
$ cd html/tutorial
@@ -111,7 +111,6 @@ $ xsltproc ../form-align.xsl results/file.rdf > results/file.html
generates <tt>results/file.html</tt> from the alignment file <tt>results/file.rdf</tt>.</p>
-<hr />
<h2>The data</h2>
<p>Your mission, if you accept it, will be to find the best alignment
@@ -130,16 +129,33 @@ These two ontologies have been used for a few year in the <a href="oaei.ontology
Alignment Evaluation Initiative</a>
</p>
-<hr />
<h2>Matching</h2>
-<p>Let's try to match these two ontologies:
+<p>
+For demonstrating the use of our implementation of the Alignment API,
+we implemented a particular processor
+(<tt>fr.inrialpes.exmo.align.util.Procalign</tt>) which:
+<ul compact="1">
+<li>Reads two OWL/RDF ontologies;</li>
+<li>Creates an alignment object;</li>
+<li>Computes the alignment between these ontologies;</li>
+<li>Displays the result.</li>
+</ul>
+Let's try to match these two ontologies:
<div class="fragment"><pre>
$ java -jar ../../lib/procalign.jar file://localhost$CWD/myOnto.owl file://localhost$CWD/edu.mit.visus.bibtex.owl
</pre></div>
+Additionaly a number of options are available:
+<ul compact="1">
+<li>displaying debug information (-d);</li>
+<li>controling the way of rendering the output (-r);</li>
+<li>deciding the implementation of the alignment method (-i);</li>
+<li>providing an input alignent (-a) [implemented but not used by most
+ methods].</li>
+</ul>
</p>
-<p>The result is displayed on the standard output Since the output is
+<p>The result is displayed on the standard output. Since the output is
too long we send it to a file by using the <tt>-o</tt> flag:
<div class="fragment"><pre>
$ java -jar ../../lib/procalign.jar file://localhost$CWD/myOnto.owl file://localhost$CWD/edu.mit.visus.bibtex.owl -o results/equal.rdf
@@ -231,7 +247,6 @@ $ java -jar ../../lib/alignwn.jar -i fr.inrialpes.exmo.align.ling.JWNLAlignment
</pre></div>
See the output in <a href="jwnl.rdf">RDF/XML</a> or <a href="jwnl.html">HTML</a>.</p></div></p>
-<hr />
<h2>Manipulating</h2>
<p>As can be seen there are some correspondences that do not really make
@@ -290,7 +305,6 @@ to compose them.</p>
levenshteinDistance and smoaDistance.
</p></div></p>
-<hr />
<h2>Output</h2>
<p>Once a good alignment has been found, only half of the work has
@@ -366,7 +380,6 @@ $ xsltproc results/SMOA5.xsl data.xml > results/data.xml
for giving the <a href="results/data.xml">results/data.xml</a> file.
</p>
-<hr />
<h2>Evaluating</h2>
<p>We will evaluate alignments by comparing them to some reference
@@ -529,7 +542,6 @@ $ java -jar ../../lib/Procalign.jar file://localhost$CWD/rdf/edu.umbc.ebiquity.p
is another class, GroupAlign, that allows to run an
</p></div-->
-<hr />
<h2>Embedding</h2>
<p>Of course, the goal of this API is not to be used at the command
@@ -631,7 +643,6 @@ implementation (like BasicAlignment or DistanceAlignment).
What about writing an editor for the alignment API?
</p></div></p>
-<hr />
<h2>Further exercises</h2>
<p>
@@ -645,7 +656,6 @@ Planning:
- Expressive alignment language (with SEKT/François Sharffe)
-->
-<hr />
<h2>Acknowledgements</h2>
<p>The format of this tutorial has been shamelessly borrowed from Sean
@@ -654,6 +664,6 @@ Planning:
<hr />
<center><small>http://alignapi.gforge.inria.fr/tutorial</small></center>
<hr />
-<!-- $Id$ -->
+$Id$
</body>
</html>
diff --git a/html/tutorial/results/jwnl.html b/html/tutorial/results/jwnl.html
new file mode 100644
index 00000000..e69de29b
diff --git a/html/tutorial/style.css b/html/tutorial/style.css
deleted file mode 100644
index dc959a80..00000000
--- a/html/tutorial/style.css
+++ /dev/null
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--
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