From 9e82e981075267f761be5028565ecb6c6e9dd630 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?J=C3=A9r=C3=B4me=20Euzenat?= <Jerome.Euzenat@inria.fr>
Date: Wed, 25 Jul 2012 09:06:57 +0000
Subject: [PATCH] - implemented selection in alignment list
---
html/relnotes.html | 2 +
.../align/service/AServProtocolManager.java | 15 ++---
.../exmo/align/service/CacheImpl.java | 20 ++++--
.../exmo/align/service/HTMLAServProfile.java | 65 +++++++++++--------
.../exmo/align/service/WSAServProfile.java | 2 +-
5 files changed, 59 insertions(+), 45 deletions(-)
diff --git a/html/relnotes.html b/html/relnotes.html
index 060b2dd7..d862123f 100644
--- a/html/relnotes.html
+++ b/html/relnotes.html
@@ -67,6 +67,8 @@ with a warning:
<!--h2>Version 4.5 (17xx): ??/??/2012 - Al pesto</h2-->
<p><ul compact="1">
<!--li>Upgraded to <span style="color: green"></span> (lib)</li-->
+<li>Added alignment selection per ontologies in list alignment interface (server)</li>
+<li>Fixed a bug with subsumption statements in <tt>OWLAxiomsRendererVisitor</tt> (impl)</li>
</ul></p>
<h2>Version 4.4 (1754): 17/07/2012 - Casa Cirilo</h2>
diff --git a/src/fr/inrialpes/exmo/align/service/AServProtocolManager.java b/src/fr/inrialpes/exmo/align/service/AServProtocolManager.java
index f6e5f8e6..80ec35dd 100644
--- a/src/fr/inrialpes/exmo/align/service/AServProtocolManager.java
+++ b/src/fr/inrialpes/exmo/align/service/AServProtocolManager.java
@@ -192,15 +192,12 @@ public class AServProtocolManager {
return alignmentCache.alignments();
}
- public Collection<Alignment> alignments( String uri1, String uri2 ) {
- if ( uri1 != null || uri2 != null ) {
- try {
- URI u1 = (uri1==null)?null:new URI( uri1 );
- URI u2 = (uri2==null)?null:new URI( uri2 );
- return alignmentCache.alignments( u1, u2 );
- } catch ( URISyntaxException usex ) {} //
- }
- return alignmentCache.alignments();
+ public Collection<URI> ontologies() {
+ return alignmentCache.ontologies();
+ }
+
+ public Collection<Alignment> alignments( URI uri1, URI uri2 ) {
+ return alignmentCache.alignments( uri1, uri2 );
}
public String query( String query ){
diff --git a/src/fr/inrialpes/exmo/align/service/CacheImpl.java b/src/fr/inrialpes/exmo/align/service/CacheImpl.java
index 1fa55dc7..5925c7d5 100644
--- a/src/fr/inrialpes/exmo/align/service/CacheImpl.java
+++ b/src/fr/inrialpes/exmo/align/service/CacheImpl.java
@@ -191,22 +191,28 @@ public class CacheImpl {
return alignmentTable.values();
}
+ protected Collection<URI> ontologies() {
+ return ontologyTable.keySet();
+ }
+
protected Collection<Alignment> alignments( URI u1, URI u2 ) {
Collection<Alignment> results = new HashSet<Alignment>();
if ( u1 != null ) {
for ( Alignment al : ontologyTable.get( u1 ) ) {
try {
- if ( al.getOntology1URI().equals( u1 ) ) {
- if ( u2 == null ) results.add( al );
- else if ( al.getOntology2URI().equals( u2 ) ) results.add( al );
- }
+ // if ( al.getOntology1URI().equals( u1 ) ) {
+ if ( u2 == null ) results.add( al );
+ else if ( al.getOntology2URI().equals( u2 )
+ || al.getOntology1URI().equals( u2 )) results.add( al );
+ // }
} catch (AlignmentException alex) {} // ignore
}
} else if ( u2 != null ) {
for ( Alignment al : ontologyTable.get( u2 ) ) {
- try {
- if ( al.getOntology2URI().equals( u2 ) ) results.add( al );
- } catch (AlignmentException alex) {} // ignore
+ //try {
+ // if ( al.getOntology2URI().equals( u2 ) )
+ results.add( al );
+ //} catch (AlignmentException alex) {} // ignore
}
} else { results = alignmentTable.values(); }
return results;
diff --git a/src/fr/inrialpes/exmo/align/service/HTMLAServProfile.java b/src/fr/inrialpes/exmo/align/service/HTMLAServProfile.java
index d8457384..6e18cf2e 100644
--- a/src/fr/inrialpes/exmo/align/service/HTMLAServProfile.java
+++ b/src/fr/inrialpes/exmo/align/service/HTMLAServProfile.java
@@ -53,6 +53,8 @@ import java.util.Enumeration;
import java.util.Iterator;
import java.util.Map;
+import java.net.URI;
+import java.net.URISyntaxException;
import java.net.Socket;
import java.net.ServerSocket;
import java.net.URLEncoder;
@@ -474,40 +476,47 @@ public class HTMLAServProfile implements AlignmentServiceProfile {
// REST get
String msg = "";
if ( perf.equals("listalignments") ) {
- String uri1 = params.getProperty("uri1");
- String uri2 = params.getProperty("uri2");
+ URI uri1 = null;
+ String u1 = params.getProperty("uri1");
+ try {
+ if ( u1 != null && !u1.equals("all") ) uri1 = new URI( u1 );
+ } catch ( URISyntaxException usex ) {}; // take all
+ URI uri2 = null;
+ String u2 = params.getProperty("uri2");
+ try {
+ if ( u2 != null && !u2.equals("all") ) uri2 = new URI( u2 );
+ } catch ( URISyntaxException usex ) {}; // take all
// Add two onto checklist
+ Collection<URI> ontologies = manager.ontologies();
msg = "<h1>Available alignments</h1><form action=\"listalignments\">";
- /*
- msg += "Onto1: <select name=\"uri1\"><option value=\"all\" selected=\"1\">all</option>";
- for ( Alignment al : manager.alignments() ) { // onto
- // I NEED TO GET THE ONTOLOGIES THERE...
- String id = al.getExtension( Namespace.ALIGNMENT.uri, Annotations.ID);
- params.setProperty("id", id);
- if ( manager.storedAlignment( new Message(newId(),(Message)null,myId,serverId,"", params ) ) ){
- String pid = al.getExtension( Namespace.ALIGNMENT.uri, Annotations.PRETTY );
- if ( pid == null ) pid = id; else pid = id+" ("+pid+")";
- msg += "<option value=\""+id+"\">"+pid+"</option>";
- }
+ msg += "Onto1: <select name=\"uri1\"><option value=\"all\"";
+ if ( uri1 == null ) msg += " selected=\"1\"";
+ msg += ">all</option>";
+ for ( URI ont : ontologies ) {
+ msg += "<option";
+ if ( ont.equals( uri1 ) ) msg += " selected =\"1\"";
+ msg += " value=\""+ont+"\">"+ont+"</option>"; //simplify
}
msg += "</select>";
- msg += "Onto2: <select name=\"uri2\"><option value=\"all\" selected=\"1\">all</option>";
- for ( Alignment al : manager.alignments() ) { // onto
- String id = al.getExtension( Namespace.ALIGNMENT.uri, Annotations.ID);
- params.setProperty("id", id);
- if ( manager.storedAlignment( new Message(newId(),(Message)null,myId,serverId,"", params ) ) ){
- String pid = al.getExtension( Namespace.ALIGNMENT.uri, Annotations.PRETTY );
- if ( pid == null ) pid = id; else pid = id+" ("+pid+")";
- msg += "<option value=\""+id+"\">"+pid+"</option>";
- }
+ msg += "Onto2: <select name=\"uri2\"><option value=\"all\"";
+ if ( uri2 == null ) msg += " selected=\"1\"";
+ msg += ">all</option>";
+ for ( URI ont : ontologies ) {
+ msg += "<option";
+ if ( ont.equals( uri2 ) ) msg += " selected =\"1\"";
+ msg += " value=\""+ont+"\">"+ont+"</option>"; //simplify
}
msg += "</select>";
- msg += " <input type=\"submit\" value=\"Update\"/></form><ul compact=\"1\">";
- if ( uri1 != null && uri1.equals("all") ) uri1 = null;
- if ( uri2 != null && uri2.equals("all") ) uri2 = null;
- //To be implemented
- */
- for ( Alignment al : manager.alignments( uri1, uri2 ) ) {
+ msg += " <input type=\"submit\" value=\"Restrict\"/></form><ul compact=\"1\">";
+ // would be better as a JavaScript which updates
+ Collection<Alignment> alignments = null;
+ if ( uri1 == null && uri2 == null ) {
+ alignments = manager.alignments();
+ } else {
+ alignments = manager.alignments( uri1, uri2 );
+ }
+
+ for ( Alignment al : alignments ) {
String id = al.getExtension( Namespace.ALIGNMENT.uri, Annotations.ID );
String pid = al.getExtension( Namespace.ALIGNMENT.uri, Annotations.PRETTY );
if ( pid == null ) pid = id; else pid = id+" ("+pid+")";
diff --git a/src/fr/inrialpes/exmo/align/service/WSAServProfile.java b/src/fr/inrialpes/exmo/align/service/WSAServProfile.java
index 26fb853d..3bc3acab 100644
--- a/src/fr/inrialpes/exmo/align/service/WSAServProfile.java
+++ b/src/fr/inrialpes/exmo/align/service/WSAServProfile.java
@@ -192,7 +192,7 @@ public class WSAServProfile implements AlignmentServiceProfile {
/**
* HTTP protocol implementation
* each call of the protocol is a direct URL
- * and the answer is through the resulting page (RDF? SOAP? HTTP?)
+ * and the answer is through the resulting page (RDF? SOAP? HTTP? JSON?)
* Not implemented yet
* but reserved if appears useful
*/
--
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