From 4b6bf05551f2e6518fda16d3399ca2ade1515c3a Mon Sep 17 00:00:00 2001
From: Maria-Elena Rosoiu <rosoiu.maria@gmail.com>
Date: Fri, 22 Jul 2011 14:16:50 +0000
Subject: [PATCH] 'modular architecture'

---
 src/fr/inrialpes/exmo/align/gen/Main.java | 194 ----------------------
 1 file changed, 194 deletions(-)
 delete mode 100644 src/fr/inrialpes/exmo/align/gen/Main.java

diff --git a/src/fr/inrialpes/exmo/align/gen/Main.java b/src/fr/inrialpes/exmo/align/gen/Main.java
deleted file mode 100644
index a13b0796..00000000
--- a/src/fr/inrialpes/exmo/align/gen/Main.java
+++ /dev/null
@@ -1,194 +0,0 @@
-/*
- * $Id$
- *
- * Copyright (C) 2011, INRIA
- *
- * This program is free software; you can redistribute it and/or
- * modify it under the terms of the GNU Lesser General Public License
- * as published by the Free Software Foundation; either version 2.1 of
- * the License, or (at your option) any later version.
- *
- * This program is distributed in the hope that it will be useful, but
- * WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- * Lesser General Public License for more details.
- *
- * You should have received a copy of the GNU Lesser General Public
- * License along with this program; if not, write to the Free Software
- * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
- * USA.
- */
-
-package fr.inrialpes.exmo.align.gen;
-
-//Java classes
-import java.io.FileOutputStream;
-import java.io.InputStream;
-
-//Jena API classes
-import com.hp.hpl.jena.ontology.OntModel;
-import com.hp.hpl.jena.ontology.OntModelSpec;
-import com.hp.hpl.jena.rdf.model.ModelFactory;
-import com.hp.hpl.jena.rdf.model.RDFWriter;
-import com.hp.hpl.jena.util.FileManager;
-
-// Alignment API implementation classes
-import java.io.File;
-import java.io.OutputStreamWriter;
-import java.nio.charset.Charset;
-import java.util.Properties;
-import fr.inrialpes.exmo.ontowrap.jena25.JENAOntology;
-import org.semanticweb.owl.align.Alignment;
-
-public class Main {
-
-      //load ontology
-    public static OntModel loadOntology ( String fileName ) {
-        InputStream in = FileManager.get().open( fileName );
-        OntModel model = ModelFactory.createOntologyModel( OntModelSpec.OWL_MEM );
-        model.read(in, null);
-        return model;
-    }
-
-    //write ontology
-    public static void writeOntology(OntModel model, String dest) {
-        try {
-            File f = new File(dest);
-            FileOutputStream fout = new FileOutputStream(f);
-            Charset defaultCharset = Charset.forName("UTF8");
-            RDFWriter writer = model.getWriter("RDF/XML-ABBREV");
-            writer.setProperty("showXmlDeclaration","true");
-            //RDFWriter writer = newModel.getWriter( "RDF/XML-ABBREV" );
-            
-            String namespace = "http://oaei.ontologymatching.org/2010/benchmarks/101/onto_new.rdf#";
-            writer.setProperty( "xmlbase", namespace );
-            writer.write(model.getBaseModel(), new OutputStreamWriter(fout, defaultCharset), "");
-            fout.close();
-        } catch (Exception ex) {
-            System.out.println("Exception " + ex.getMessage());
-        }
-    }
-
-
-    public static void printUsage() {
-        System.out.println( "inputOntology outputOntology parameters" );
-        System.out.println( "[--------------------------------------------------------------------------]" );
-        System.out.println( "[------------- The list of all modification is the following --------------]" );
-
-        System.out.println( "[1. Remove percentage subclasses       \"removeSubClass\"    --------------]" );
-        System.out.println( "[2. Remove percentage properties       \"removeProperty\"    --------------]" );
-        System.out.println( "[3. Remove percentage comments         \"removeComment\"     --------------]" );
-        System.out.println( "[4. Remove percentage restrictions     \"removeRestriction\" --------------]" );
-        System.out.println( "[5. Add percentage subclasses          \"addSubClass\"       --------------]" );
-        System.out.println( "[6. Add percentage properties          \"addProperty\"       --------------]" );
-        System.out.println( "[7. Rename percentage classes          \"renameClasses\"     --------------]" );
-        System.out.println( "[8. Rename percentage properties       \"renameProperties\"  --------------]" );
-
-        System.out.println( "[9. Remove all the classes from a level\"removeClasses\"    ---------------]" );
-        System.out.println( "[10. Add nbClasses to a specific level \"addClasses\"       ---------------]" );
-        System.out.println( "[11. Level flattened                   \"levelFlattened\"   ---------------]" );
-        System.out.println( "[12. Remove individuals                \"removeIndividuals\"   ------------]" );
-        //noHierarchy
-        System.out.println( "[--------------------------------------------------------------------------]" );
-        System.exit(-1);
-    }
-
-    public static void main (String [] args) {
-        String fileName = "", destFile = "";
-        Properties parameters;
-
-        if ( args.length < 2 ) {
-            System.out.println("Usage");
-            printUsage();
-        }
-        else {
-            System.out.println( "Input ontology:  [" + args[0] + "]" );
-            System.out.println( "Output ontology: [" + args[1] + "]" );
-
-            fileName = args[0];
-            destFile = args[1];
-            parameters = new Properties();                                      //initialize the parameters
-
-            for ( int i=2; i<args.length; i+=2 ) {
-                if ( args[i].equals("addSubClass") )                            /* add percentage classes */
-                    parameters.setProperty(ParametersIds.ADD_SUBCLASS, args[i+1]);
-
-                //add c classes beginning from level l -> the value of this parameters should be:
-                //beginning_level.number_of_classes_to_add
-                if ( args[i].equals("addClasses") )                             /* add c classes beginning from level l */
-                    parameters.setProperty(ParametersIds.ADD_CLASSES, args[i+1]);
-
-                if ( args[i].equals("removeSubClass") )                         /* remove percentage classes */
-                    parameters.setProperty(ParametersIds.REMOVE_SUBCLASS, args[i+1]);
-
-                if ( args[i].equals("removeClasses") )                          /* remove classes from level */
-                    parameters.setProperty(ParametersIds.REMOVE_CLASSES, args[i+1]);
-
-                if ( args[i].equals("addProperty") )                            /* add percentage properties */
-                    parameters.setProperty(ParametersIds.ADD_PROPERTY, args[i+1]);
-
-                if ( args[i].equals("removeProperty") )                         /* remove percentage properties */
-                    parameters.setProperty(ParametersIds.REMOVE_PROPERTY, args[i+1]);
-
-                if ( args[i].equals("renameProperties") )                       /* rename percentage properties */
-                    parameters.setProperty(ParametersIds.RENAME_PROPERTIES, args[i+1]);
-
-                if ( args[i].equals("removeComment") )                          /* remove percentage comments */
-                    parameters.setProperty(ParametersIds.REMOVE_COMMENT, args[i+1]);
-
-                if ( args[i].equals("levelFlattened") )                         /* flattened level */
-                    parameters.setProperty(ParametersIds.LEVEL_FLATTENED, args[i+1]);
-
-                if ( args[i].equals("renameClasses") )                          /* rename percentage classes */
-                    parameters.setProperty(ParametersIds.RENAME_CLASSES, args[i+1]);
-
-                if ( args[i].equals("renameResources") )                        /* rename percentage resources */
-                    parameters.setProperty(ParametersIds.RENAME_RESOURCES, args[i+1]);
-
-                if ( args[i].equals("removeRestriction") )                      /* remove percentage restrictions */
-                    parameters.setProperty(ParametersIds.REMOVE_RESTRICTION, args[i+1]);
-
-                if ( args[i].equals("removeIndividuals") )                      /* remove percentage individuals */
-                    parameters.setProperty(ParametersIds.REMOVE_INDIVIDUALS, args[i+1]);
-
-                if ( args[i].equals( ("noHierarchy")) )                         /* no hierarchy */
-                    parameters.setProperty( ParametersIds.NO_HIERARCHY, ParametersIds.NO_HIERARCHY);
-            }
-
-            try {
-                OntModel model = loadOntology( fileName );                      //load the initial ontology
-                TestGenerator t = new TestGenerator();                          //build an instance of TestGenerator
-                JENAOntology onto = new JENAOntology();                         //cast the model into Ontology
-                onto.setOntology( (OntModel)model );
-
-                Alignment align = t.generate(onto, parameters);                 //generate the alignment
-                
-                JENAOntology modified = (JENAOntology)t.getModifiedOntology();  //get the modified ontology
-                if ( modified.getOntology() instanceof OntModel ) 
-                    writeOntology(modified.getOntology(), destFile);            //write the ontology
-
-                /* Prints the reference alignment
-                OutputStream stream = new FileOutputStream( "fancyAlignment.rdf" );
-                // Outputing
-                PrintWriter  writer = new PrintWriter (
-                                        new BufferedWriter(
-                                            new OutputStreamWriter( stream, "UTF-8" )), true);
-                AlignmentVisitor renderer = new RDFRendererVisitor( writer );
-                align.render(renderer);
-                writer.flush();
-                writer.close();
-                */
-            }
-            catch ( Exception ex ) {
-                System.err.println( "Error " + ex.getMessage()  );
-
-            }
-
-            System.out.println( "***" );
-            System.out.println( "END" );
-            System.out.println( "***" );
-        }
-    }
-
-}
-
-- 
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